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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr2g079990.2 |
Common Name | MTR_2g079990 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
NAC |
Protein Properties |
Length: 383aa MW: 43493.1 Da PI: 7.2156 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr2g079990.2 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.2 | 5.6e-52 | 16 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrF Ptdeel+v+yL++kv+g++++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++
Medtr2g079990.2 16 LPPGFRFYPTDEELLVQYLCRKVAGHHFSL-QIIAEIDLYKFDPWILPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITN 108
79***************************9.89***************7777799***********************************9999 PP
NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
+g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Medtr2g079990.2 109 -EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 141
.999****************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009414 | Biological Process | response to water deprivation |
GO:0005634 | Cellular Component | nucleus |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MIMGIQDKDP LAQLSLPPGF RFYPTDEELL VQYLCRKVAG HHFSLQIIAE IDLYKFDPWI 60 LPSKAIFGEK EWYFFSPRDR KYPNGTRPNR VAGSGYWKAT GTDKIITNEG RKVGIKKALV 120 FYVGKAPKGT KTNWIMHEYR LLDSSRNNGG TKVLYTFIFF YHAIIIITTL IYLYFVVELQ 180 LDDWVLCRIY KKNSSAQKPI PNGVISSREY TQYSNGSSSS SSSHLDDVLE SLPQIDDRCF 240 KLPHVNSLRT TQHRQQEEEE KLNLQNNNFM DWSNSSSILN TVTGFQEGQT QGMMNFSGCN 300 DLYVPTLCQM DSSVITEKTS NISVHPTEEE VQSGAKANQV ENSSGFFQRG SNDFTQGMGY 360 ANPVDPFGFR YPVQPVGFGF QQ*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-104 | 3 | 198 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-104 | 3 | 198 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-104 | 3 | 198 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-104 | 3 | 198 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-104 | 3 | 198 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-104 | 3 | 198 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-104 | 3 | 198 | 4 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in guard cells of the epidermis. {ECO:0000269|PubMed:25005917}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in abscisic acid-mediated stomatal closure (PubMed:25005917). Regulates the expression of NCED1, a gene involved in the biosynthesis of abscisic acid (ABA) (PubMed:25005917). Required for the stomatal closure induced by the bacterial pathogen Pseudomonas syringae pv tomato DC3000, but not for stomatal reopening (PubMed:25005917). {ECO:0000269|PubMed:25005917}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), dehydration and wounding. {ECO:0000269|PubMed:25005917}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT137564 | 0.0 | BT137564.1 Medicago truncatula clone JCVI-FLMt-16H20 unknown mRNA. |