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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr2g039370.1 |
Common Name | MTR_2g039370 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
FAR1 |
Protein Properties |
Length: 297aa MW: 35340.7 Da PI: 10.1295 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr2g039370.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 49.7 | 1.2e-15 | 100 | 168 | 20 | 90 |
FAR1 20 kkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++ ++ + + ++f+Csk+g++++e + + + + + +rt+Cka+++ + +k+g+w++tkl+l+HnH ++
Medtr2g039370.1 100 YYDNERKMTRFKEFYCSKQGFKNNEYEG--EVSYEGVDSRTNCKAMVRFNVSKEGVWKITKLVLDHNHVFV 168
555666778899************9988..889999********************************876 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MVVKVDTEGN IIKEFGDNNF VTSTIEFEDR LYLGSIKTDF VEKFSLQSEK MISMNLNRLK 60 LMGQKKFFLV KLSITKMKLI TYTKNMPSER VLVWERGELY YDNERKMTRF KEFYCSKQGF 120 KNNEYEGEVS YEGVDSRTNC KAMVRFNVSK EGVWKITKLV LDHNHVFVSG ELPLIHKSKT 180 RKSWSWKKNK SRVDQKITEN KDKNLYDLFV PENLLSTRRR RESINDNENQ IKNVSQVLAK 240 NKDLDSETKK LMNFKLFLWP NYRLEDLACI NRYWFNTHNG SHFSILRIHM YPRLKD*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Mtr.22124 | 1e-119 | flower| glandular trichome| leaf| root| seed |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC148775 | 0.0 | AC148775.2 Medicago truncatula chromosome 2 clone mth2-62i21, complete sequence. |