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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr1g090170.1 |
Common Name | MTR_1g090170 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 404aa MW: 45168.9 Da PI: 7.0045 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr1g090170.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.2 | 9.7e-19 | 239 | 288 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+kGVr+++ +g+WvAeIr p++ r+r++lg+f tae+Aa a++ a+ l+ge
Medtr1g090170.1 239 FKGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFETAEDAAIAYDTAAYILRGE 288
8******9.**********955...5************************9997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MEIFTQKELP TCFQEIATTE SKYLEDTIIR RGSYSLTSSS TSSPQKLFWC TSNSTSMKQE 60 VPLTTLVNQI PAKFNDHHDD MKNMKAINQS ISEFNSISNP NVLASDIKHS FVPLNLLETL 120 PALTVAPMSD EPAVSLASST CATPKSPNLT LFLQEPSMLY SSTSNIKSSE IMSTSSNPTY 180 PMSQFGLTQH HQQSAYEFYD SNKMDRNMIT NLQSKSFNEN WLSATKTQPM KYGTRGKLFK 240 GVRQRHWGKW VAEIRLPRNR TRVWLGTFET AEDAAIAYDT AAYILRGECA QLNFPNLKHV 300 IQANSLNGTT ASLVEAKLQA ISQGVSSSHR KQGDSSARLN NRHIDEIKNG KDESIKELKV 360 VGDITERSKS TQNEICDVET VQLSRMPSLD MDIIWNELLV SDS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC166707 | 0.0 | AC166707.9 Medicago truncatula strain cultivar Jemalong A17 clone mte1-13o17, complete sequence. |