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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr1g045610.1 |
Common Name | MTR_1g045610 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
MYB |
Protein Properties |
Length: 259aa MW: 30264.1 Da PI: 9.6357 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr1g045610.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.4 | 3.9e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd ll+d+v+++G g+W+++ar g++R +k+c++rw +yl
Medtr1g045610.1 23 KGPWTAEEDRLLIDYVRLHGEGRWNSVARLTGLKRNGKSCRLRWVNYL 70
79******************************9*************97 PP
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2 | Myb_DNA-binding | 52.7 | 9.7e-17 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
Medtr1g045610.1 76 RGQITPQEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120
7888******************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MYWRGVMAGQ IGHGIMEEEV WRKGPWTAEE DRLLIDYVRL HGEGRWNSVA RLTGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PQEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKNPFD AAEKAKNRFL RKQLFHQQQQ QQQLQQQQQQ QQLQFNLDMK GVMSMFEENN 180 SHRVPYISQA RQEIFNMYPN TTEDQGYFML NGNSSVPNAT EDDTLLDGLW NLDDVQGNFS 240 VANATNKAGL YNLVAPYC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC174312 | 0.0 | AC174312.19 Medicago truncatula clone mth2-157b7, complete sequence. |