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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr1g016490.1 |
Common Name | MTR_1g016490 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
TALE |
Protein Properties |
Length: 525aa MW: 59220.1 Da PI: 5.8916 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr1g016490.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 26.1 | 1.5e-08 | 443 | 481 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
Medtr1g016490.1 443 MFQNflHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVR 481
5887779******************************88 PP
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2 | BELL | 75.2 | 1e-24 | 314 | 384 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
+r+++++k+++Ll ll++Vd +Y+q+ ++++tv+s+F+a+++l++ ++++++A k++Sr ++ L+++i+++i
Medtr1g016490.1 314 QRHAVESKQSQLLMLLQMVDSQYSQCLDEIHTVVSAFHAATELDP-QIHAHFAVKTVSRLYKDLRERISKHI 384
68999****************************************.***********************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008285 | Biological Process | negative regulation of cell proliferation |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0010073 | Biological Process | meristem maintenance |
GO:0010227 | Biological Process | floral organ abscission |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0090470 | Biological Process | shoot organ boundary specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 525 aa
Download sequence Send
to blast |
MENDVYTAQM NMEDITQHLT QKPLIHYYSF DLNNQNNIIN GIPILSGGEQ DQHVDGSFMN 60 QVTIADNSFV TSQQGRTIVE NPSNLIVNNN DFSVPARIGL QENLEAIVPY IFNNWHDTSN 120 SNPLCATFGD NNSYVNKFLK AQESNVGTEF MSYSPIGNID PNGWQSSNVA NLTNLAYSSS 180 NCSNELSLSL ATSPTSVQCS EISCSDLTHS MNGTRSGLEQ ASCSSMELSM SLGNDKHVKF 240 SPAILGSRYL AVIQEILVQI ATFSFENLDE INYSGSGVRG RGNKSTSSNT TKRRIGINRD 300 ESPMSEAYAD SSLQRHAVES KQSQLLMLLQ MVDSQYSQCL DEIHTVVSAF HAATELDPQI 360 HAHFAVKTVS RLYKDLRERI SKHILSMGSN FNSSWSEEDK ELSVETSFIQ KQWALQQLKR 420 KDQLWRPQRG LPERSVSVLR DWMFQNFLHP YPKDAEKHLL AIKSGLTRSQ VSNWFINARV 480 RLWKPLIEEM YAEMNRRKAC RNEGENESSE RSRISINNQM FDMN*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Down-regulated in the shoot apical meristem (SAM) upon floral induction. {ECO:0000269|PubMed:17908157}. |
Uniprot | TISSUE SPECIFICITY: Most abundant in flowers. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC174304 | 0.0 | AC174304.20 Medicago truncatula clone mth2-108f8, complete sequence. |