|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Medtr1g006660.1 |
Common Name | MTR_1g006660 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
|
Family |
ERF |
Protein Properties |
Length: 258aa MW: 28551.8 Da PI: 5.1732 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr1g006660.1 | genome | Mt | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.3 | 4.3e-19 | 45 | 95 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++aa+++ +g
Medtr1g006660.1 45 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDAAALCVKG 95
68*****998.**********843...6**********************99876 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MRVSPQNSET ESTSNSSPYT TNSIQEDQES NNKKLKRNRD SNKHPVYRGV RMRNWGKWVS 60 EIREPRKKSR IWLGTFPTAE MAARAHDAAA LCVKGKSAIL NFPHLRDSLP KPVSLAPRDV 120 QAAAAKAAQM DIGKFELSSS SSSLSSLSTS SLTTMSTSTS LLMKTTKTLS SSADLSATSE 180 ELSEIIELPT LENGYDDVGK EEFVYVDSQA QDYAWMMYQQ PMTWLQTTQE EDGCCVGDDG 240 LVNNGVVTSF ESFMWNY*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |