![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
MapolyY_B0018.14.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
|
Family |
bHLH |
Protein Properties |
Length: 517aa MW: 58155.5 Da PI: 5.9806 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MapolyY_B0018.14.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Mpo&pid=MapolyY_B0018.14.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 23.6 | 9e-08 | 436 | 463 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.a 30
+h ++Er+RR+++N++f Lr+++P+ +
MapolyY_B0018.14.p 436 NHVQAERQRREKLNQRFYALRSVVPNvS 463
6999*********************944 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009269 | Biological Process | response to desiccation |
GO:0009611 | Biological Process | response to wounding |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009963 | Biological Process | positive regulation of flavonoid biosynthetic process |
GO:0010200 | Biological Process | response to chitin |
GO:0043619 | Biological Process | regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051090 | Biological Process | regulation of sequence-specific DNA binding transcription factor activity |
GO:2000068 | Biological Process | regulation of defense response to insect |
GO:0005634 | Cellular Component | nucleus |
GO:0043425 | Molecular Function | bHLH transcription factor binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MVQKARRFFG CTFHDVQYQI LRAHLEEQRS IGGFIHLYLE QRVLGWGDGY FKGPKESENA 60 DPRGTEKDQT CREEDQLIRR KVLRELQALV CTGEDDTTAS TGLDYVTDTE WFYLVSMSYF 120 FSHGVGTPGQ ALASGEYVWL LEANKAPSHV CTRADLAKMA GIQTIACIPT KNGVVELGST 180 ELIFESWEVI NNIKEFFSEG IFEQSRRYQK PHLSSGKIGA MGCTHVTYPT GIDISNDVIS 240 NSCVKCNTFD KLNASSLPSN VDSLDYLFSD DASLVEIPLE TDKNHMQPVG VPTLQSRLII 300 EEDKTAVFSK PLYLSLDQGR TAVSETGEIL NPPEMTLNLR RSENQLQQKD SKFYLKKETM 360 SVDSQSKDRA GESANHQVVD AKGVSLPSFV GRSSIESEQD VDSEAEVSYK DVVLVEQKPP 420 RKRGRKPAHD REEPLNHVQA ERQRREKLNQ RFYALRSVVP NVSKMSVKNV LTREQLLGAI 480 EKAFQSNTVD LKEQEQLSKD KRPTISHFTI QCPDKV*
|
3D Structure ? help Back to Top |
![Structure](draw_protein_structure.php?sp=Mpo&pid=MapolyY_B0018.14.p) |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 2e-25 | 43 | 198 | 46 | 193 | Transcription factor MYC3 |
4rqw_B | 2e-25 | 43 | 198 | 46 | 193 | Transcription factor MYC3 |
4rs9_A | 2e-25 | 43 | 198 | 46 | 193 | Transcription factor MYC3 |
4yz6_A | 2e-25 | 43 | 198 | 46 | 193 | Transcription factor MYC3 |