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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MapolyY_B0018.13.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family |
bHLH |
Protein Properties |
Length: 512aa MW: 57654.9 Da PI: 5.9806 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MapolyY_B0018.13.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 23.7 | 8.9e-08 | 431 | 458 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.a 30
+h ++Er+RR+++N++f Lr+++P+ +
MapolyY_B0018.13.p 431 NHVQAERQRREKLNQRFYALRSVVPNvS 458
6999*********************944 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009269 | Biological Process | response to desiccation |
GO:0009611 | Biological Process | response to wounding |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009963 | Biological Process | positive regulation of flavonoid biosynthetic process |
GO:0010200 | Biological Process | response to chitin |
GO:0043619 | Biological Process | regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051090 | Biological Process | regulation of sequence-specific DNA binding transcription factor activity |
GO:2000068 | Biological Process | regulation of defense response to insect |
GO:0005634 | Cellular Component | nucleus |
GO:0043425 | Molecular Function | bHLH transcription factor binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 512 aa
Download sequence Send
to blast |
MVQKARRFFG CTFHDVQYQI LRAHLEEQRS IGGFIHLYLE QRVLGWGDGY FKGPKESENA 60 DPRGTEKDQT CREEDQLIRR KVLRELQALV CTGEDDTTAS TGLDYVTDTE WFYLVSMSYF 120 FSHGVGTPGQ ALASGEYVWL LEANKAPSHV CTRADLAKTI ACIPTKNGVV ELGSTELIFE 180 SWEVINNIKE FFSEGIFEQS RRYQKPHLSS GKIGAMGCTH VTYPTGIDIS NDVISNSCVK 240 CNTFDKLNAS SLPSNVDSLD YLFSDDASLV EIPLETDKNH MQPVGVPTLQ SRLIIEEDKT 300 AVFSKPLYLS LDQGRTAVSE TGEILNPPEM TLNLRRSENQ LQQKDSKFYL KKETMSVDSQ 360 SKDRAGESAN HQVVDAKGVS LPSFVGRSSI ESEQDVDSEA EVSYKDVVLV EQKPPRKRGR 420 KPAHDREEPL NHVQAERQRR EKLNQRFYAL RSVVPNVSKM SVKNVLTREQ LLGAIEKAFQ 480 SNTVDLKEQE QLSKDKRPTI SHFTIQCPDK V*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 1e-22 | 43 | 193 | 46 | 193 | Transcription factor MYC3 |
4rqw_B | 1e-22 | 43 | 193 | 46 | 193 | Transcription factor MYC3 |
4rs9_A | 1e-22 | 43 | 193 | 46 | 193 | Transcription factor MYC3 |
4yz6_A | 1e-22 | 43 | 193 | 46 | 193 | Transcription factor MYC3 |