 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Mapoly0293s0001.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
|
| Family |
ERF |
| Protein Properties |
Length: 241aa MW: 27280.7 Da PI: 6.2926 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Mapoly0293s0001.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.7 | 8.2e-20 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr++ +g+WvAeIrdp gkr r++lg+f t+eeAa+a+++ +++++g
Mapoly0293s0001.1.p 36 EYKGVRQRT-WGKWVAEIRDP---GKRSRVWLGTFNTKEEAAAAYDRKALQFFG 85
69****999.**********9...557**********************99887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MCRMNKRLGK GETGLPKKWS KASSRGKGGP ENFSCEYKGV RQRTWGKWVA EIRDPGKRSR 60
VWLGTFNTKE EAAAAYDRKA LQFFGPNAHF NLQSSQLAPK SNQNAVFTPL FSVPPRTLFS 120
RTDPYPQVSE AYEIPPQPLK VETNLCENFE ALYTGSNDAS LLQEPFINFP DKDIEELPPL 180
HTHSVIDETQ DFFIPLQVKG LKKNEELPAL DVDCENLDKQ PDFDFASYLN EIAFKYDGPR 240
*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 6e-16 | 37 | 92 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 2gcc_A | 8e-16 | 37 | 92 | 6 | 62 | ATERF1 |
| 3gcc_A | 8e-16 | 37 | 92 | 6 | 62 | ATERF1 |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
