PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0232s0001.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bHLH | ||||||||
Protein Properties | Length: 481aa MW: 52861.6 Da PI: 8.8395 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 7.2e-09 | 289 | 340 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h rEr RR ++ + +L +++Pk+ ++ K + +i+ A +Y+k +q Mapoly0232s0001.3.p 289 KSDHMRRERDRRIALKLMYKTLDSMIPKP--SKKSKRDRTAIVDDALKYVKGMQ 340 677999**********************6..3*******************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.014 | 287 | 339 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.64E-7 | 288 | 344 | No hit | No description |
Pfam | PF00010 | 2.1E-6 | 289 | 340 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.8E-9 | 289 | 347 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.28E-9 | 289 | 347 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.0E-5 | 293 | 345 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence Send to blast |
MLDAFVVTCH KQMIPWTDLG RVRCNNAHAS FVHAITAHFE ADRQLTCGMG MNKVQIGNGR 60 TPTVFTPWTS HAPLEATSFV AESGTYSQPT YAHGGAGDSW PSFTFSPEQI DYRQAPVSVP 120 ESSPSTPPLL YDTVTLGPII DCSGVADLIL DKGSTPFFKD KEKETTPSAR IILPAAAASV 180 TGNATAIPPK LQLGPVATQN HASVATDCQR LLQLGKDDQV KKSDLLSAGA NWEFSERVPP 240 DPNRNQASTL DKEAKSKAST EQRKIATMHE GYLKNYKKDR LPNVVTLQKS DHMRRERDRR 300 IALKLMYKTL DSMIPKPSKK SKRDRTAIVD DALKYVKGMQ EKLEKFRLKG IGVKKISTIS 360 NRLLEPEHEN LLACSPAELP SRLGKLTAAT GAAREQGTEI SVITSHDERL GSDSSLLMEP 420 QVQVFIGCGN DVLISFSCKP RGNLISCVLQ ALEMFCLEVK QYTFSKILKE LVHCNFMTKS 480 * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6VZM3 | 0.0 | A0A2R6VZM3_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41240.2 | 2e-07 | basic helix-loop-helix protein 100 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0232s0001.3.p |