PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0232s0001.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 481aa    MW: 52861.6 Da    PI: 8.8395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0232s0001.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27.2e-09289340255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +  h  rEr RR  ++  + +L +++Pk+   ++ K +  +i+  A +Y+k +q
  Mapoly0232s0001.2.p 289 KSDHMRRERDRRIALKLMYKTLDSMIPKP--SKKSKRDRTAIVDDALKYVKGMQ 340
                          677999**********************6..3*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.014287339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.64E-7288344No hitNo description
PfamPF000102.1E-6289340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-9289347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.28E-9289347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-5293345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MLDAFVVTCH KQMIPWTDLG RVRCNNAHAS FVHAITAHFE ADRQLTCGMG MNKVQIGNGR  60
TPTVFTPWTS HAPLEATSFV AESGTYSQPT YAHGGAGDSW PSFTFSPEQI DYRQAPVSVP  120
ESSPSTPPLL YDTVTLGPII DCSGVADLIL DKGSTPFFKD KEKETTPSAR IILPAAAASV  180
TGNATAIPPK LQLGPVATQN HASVATDCQR LLQLGKDDQV KKSDLLSAGA NWEFSERVPP  240
DPNRNQASTL DKEAKSKAST EQRKIATMHE GYLKNYKKDR LPNVVTLQKS DHMRRERDRR  300
IALKLMYKTL DSMIPKPSKK SKRDRTAIVD DALKYVKGMQ EKLEKFRLKG IGVKKISTIS  360
NRLLEPEHEN LLACSPAELP SRLGKLTAAT GAAREQGTEI SVITSHDERL GSDSSLLMEP  420
QVQVFIGCGN DVLISFSCKP RGNLISCVLQ ALEMFCLEVK QYTFSKILKE LVHCNFMTKS  480
*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6VZM30.0A0A2R6VZM3_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.22e-07basic helix-loop-helix protein 100