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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Mapoly0210s0005.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family |
MYB |
Protein Properties |
Length: 298aa MW: 34060.4 Da PI: 5.1803 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Mapoly0210s0005.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 61 | 2.6e-19 | 63 | 107 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+WT+eEd l av+q+ g++Wk+Ia+ ++ +R+++qc +rwqk+l
Mapoly0210s0005.1.p 63 SWTEEEDTALRAAVEQFKGRNWKKIAANVP-NRSDNQCLNRWQKVL 107
6*****************************.************986 PP
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2 | Myb_DNA-binding | 59.4 | 7.7e-19 | 113 | 158 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+WT+eEd++l++ v+++G++tW++Iar ++ R +kqc++rw +
Mapoly0210s0005.1.p 113 KGSWTKEEDDKLLEMVNEFGTKTWAAIARSLP-SRNGKQCRERWCNN 158
799*****************************.***********996 PP
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3 | Myb_DNA-binding | 44.4 | 3.9e-14 | 165 | 207 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+ +W +eEd +l a+k++G+ W++Ia+ ++ gR+++ +k+rw+
Mapoly0210s0005.1.p 165 KEPWNEEEDMKLFLAHKRFGNS-WSKIAKLIP-GRSENGIKNRWN 207
679*****************99.*********.***********7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MEKMEASTSS TLPKLPLRRC LEDISNSSEP NLPSAAVVDV TLGTKGKKLR VYHAPRRRRP 60 YTSWTEEEDT ALRAAVEQFK GRNWKKIAAN VPNRSDNQCL NRWQKVLDPA LVKGSWTKEE 120 DDKLLEMVNE FGTKTWAAIA RSLPSRNGKQ CRERWCNNLD PQIKKEPWNE EEDMKLFLAH 180 KRFGNSWSKI AKLIPGRSEN GIKNRWNITI QKRADALEQS TENWINRNTF EDMLSIIDDV 240 APTELDVSED HLALNGEANI DLQDSNAAKD LIAWNLEFDM DVDVDNFLDL PDLNLSP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (PubMed:21862669). Involved in the regulation of cytokinesis, probably via the activation of several G2/M phase-specific genes transcription (e.g. KNOLLE) (PubMed:17287251, PubMed:21862669, PubMed:25806785). Required for the maintenance of diploidy (PubMed:21862669). {ECO:0000269|PubMed:17287251, ECO:0000269|PubMed:21862669, ECO:0000269|PubMed:25806785}.; FUNCTION: Involved in transcription regulation during induced endoreduplication at the powdery mildew (e.g. G.orontii) infection site, thus promoting G.orontii growth and reproduction. {ECO:0000269|PubMed:20018666}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid (SA) (PubMed:16463103). Expressed in a cell cycle-dependent manner, with highest levels 2 hours before the peak of mitotic index in cells synchronized by aphidicolin. Activated by CYCB1 (PubMed:17287251). Accumulates at powdery mildew (e.g. G.orontii) infected cells. {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:17287251}. |
Orthologous Group
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |