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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0166s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | ERF | ||||||||
Protein Properties | Length: 556aa MW: 61578.6 Da PI: 6.2055 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.9 | 3.9e-21 | 190 | 239 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+t+eeAa+a+++a+ +++g Mapoly0166s0010.1.p 190 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTPEEAARAYDRAAINFRG 239 8********.**********94....45***********************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.02E-34 | 189 | 249 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.0E-31 | 190 | 249 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.948 | 190 | 247 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-22 | 190 | 249 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 6.4E-15 | 190 | 239 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.5E-36 | 190 | 253 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-11 | 191 | 202 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-11 | 213 | 229 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 556 aa Download sequence Send to blast |
MIMCKNPVGV LGAGGESERN LRVSEFDTPA YVPSGYLRNQ YNQQLLMAEQ NKQNQAQQQR 60 RRFEKASAAT SQSFLSESPL DQPWYSQSSS GSQTFMNSAT PSDFSAPAFN YNQAYAQNWQ 120 GLAPVSEASQ TWNLRAEEST GSDWGLSSDS GKSSILSTSF TPRLEESEKP VPAEDSSAAS 180 YTEEAPKRKR YRGVRQRPWG KWAAEIRDPK KAARVWLGTF DTPEEAARAY DRAAINFRGL 240 RAKLNFQDSR DVLAVSGAAT QAEASASRRS PPKSKAAAAI AIAASRAATP ESVLVSRAQT 300 QSIPQQSPPP AHPERLGVEE PAYYPSQISY PAHFRSSTVG QQQQLQLEEQ RKQLEQQRMR 360 KSQELLQGIF SQYMSSASQS MSLLSSGAGP SSHGSSGDHS SALMSSGAHT STIMTTEATR 420 DDRAANPAVW MQQQQYVQEQ QQSSSSANVF QNSQHEWNPV MQQQQQQQQQ QRQVPTMMNQ 480 LVDQQHQQLL FQRDQQPAPQ ELSFEQIFEQ GGPNDWGLID PVDLCELNNS SVKELTGFNV 540 WNMYPQQDRP ASSGS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 1e-20 | 189 | 246 | 1 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A176W9V1 | 0.0 | A0A176W9V1_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6W3D8 | 0.0 | A0A2R6W3D8_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 3e-30 | related to AP2 6l |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0166s0010.1.p |