PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0150s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bHLH | ||||||||
Protein Properties | Length: 693aa MW: 72934.3 Da PI: 5.7305 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.6 | 1.6e-11 | 504 | 546 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk +K++ a+iL A++Y+++L Mapoly0150s0016.1.p 504 MAERRRRKKLNDRLYMLRSVVPKI-----TKMDRASILGDAIDYLRDL 546 79*********************7.....7***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.567 | 497 | 546 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.83E-15 | 500 | 558 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.8E-9 | 503 | 546 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-14 | 503 | 552 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-15 | 504 | 558 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.59E-13 | 504 | 551 | No hit | No description |
CDD | cd04873 | 7.90E-4 | 620 | 676 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 693 aa Download sequence Send to blast |
MASTRVSGAS AWMAGSSSNL RLPSSIPFLE DDPNPRWRHT PAPCQQNQMT QEHSLVKDDL 60 PSSIGFSQGL SDIPSSTYSK GILEEDWYMT TENSLMDEMK ELSYAASSLA TQSEPMTSSH 120 YSLDSTHLNF LSRNASKNFN SADNRSYLSN FMEGGGLPFD TSGTGPLNSF GHTGPHGGGA 180 GVVGGHNGNA ILHNHGQIGL STSSPLAGNN QFSGSNMSIL PNSGLVAGNS GFSNLHSNSN 240 SLNESMLLSN ISSRPTLGGS SFGQNLSGFL NGGISNAFSC GSGPPIDANF AQSLSSSMAR 300 GAASVDMFNS NNHNSLGRTI AGNTIKSTSP LLNVDKPPFR SKAGVLSPDA VTATVAGSQQ 360 TIFQKRAALR RTVSSSGGSI SPKLKTHPQL VTSVSNDSSV DMPDEESPNI KNPSKGKKAV 420 SPASRVDKRP PALPSGSDEM ADGDQDDGKD DDDMDESGDV SGMLYEDDAA GMDGAAAGQG 480 MLQSGGHSGE KGKGKKGLPA KNLMAERRRR KKLNDRLYML RSVVPKITKM DRASILGDAI 540 DYLRDLVAKI HELHAELDGD TAADKPPPLS PSAPLPMQIT SALAYRVKEE PPSTFPDLTP 600 TTIEVSAKEE GKALNIHMLC ARKPGLLLSI MRALDGLGLE VEQGVVSCFN GFALDIFRAE 660 QLSGLDVGPE EIRQALLLTT GASPVEQNVI LQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 490 | 496 | KGKGKKG |
2 | 505 | 512 | ERRRRKKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A176VHX4 | 0.0 | A0A176VHX4_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6W565 | 0.0 | A0A2R6W565_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP557 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12860.1 | 2e-62 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0150s0016.1.p |