PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0150s0015.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 724aa    MW: 76407.5 Da    PI: 6.6416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0150s0015.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21e-11509551754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++ErrRR+++N+++  Lr+++Pk      +K++ a+iL  A+eY+k+L
  Mapoly0150s0015.1.p 509 MAERRRRKKLNDRLYMLRSVVPKI-----TKMDRASILGDAIEYLKEL 551
                          79*********************7.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.599502551IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.02E-15505567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-14508557IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-9508551IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-15509562IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.16E-12509551No hitNo description
CDDcd048735.63E-5651710No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010440Biological Processstomatal lineage progression
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050826Biological Processresponse to freezing
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    Send to blast
MMTSTTRPAP GGVWMAGNSP DLRLASCIPG IENDLRWRPT NCQSPSSNDP TAMKDDLPSS  60
SGFSAKGMLD DESWYMGPES TLLDEMKELV GSQQQQQHQH QHHHQHQHQQ QDNMSSAHFN  120
TLDAPHLHGL FNRSNVNRSF GGLSSFLDTG MQYDGGMSSI HCQGGGGPAG AAGMGGNFLQ  180
HQHQPQADGQ SAVGGSSSSG VIAMPSLGPN VHSGNVRGAL LSNLSPRGGL QVEGGGGGGA  240
AFGHQGANLN KLLSTCSFTN AVGGFNNHHA HAHHSAHHGL GAAGMGSGGF GDTYNNSLSR  300
NLMAKDNHSL QMLNVERPPY LSKHLLCSSS SAQKVAPCST TSTSSQQHKR GGTLRHAVSG  360
GPISPAPVDK ASLRVITSAS NDSSVNMPGD DRSNAGGKPD KAMVVNMCGP APAPAPAPSS  420
AGAKDDAKAK LGSDDGGATA GDTDMADTEP RLDQDEAKDD DDIEESGYGS GLYEADDMNG  480
MDGQGPGTAL SLHGEKGKGK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP KITKMDRASI  540
LGDAIEYLKE LLDRINDLHN ELGSTTPLDR PPIQQQQQQN NHNNNNSSNN NNNVVNSAAL  600
QAAMPQPSSS TLTTCRVKEE LPSSIPSPDS QQQPQTLRVD VNMGERRGLN IHMFCSRRPG  660
LLLSTMRALD GLGLEVQQAV VSCFNGFALD VFRAEQLQDN EIGSEEVRSV LLHVAGANVS  720
ALQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1495501KGKGKKG
2510517ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VGE60.0A0A176VGE6_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.42e-68bHLH family protein