PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0114s0037.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 461aa    MW: 49442.3 Da    PI: 8.1179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0114s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10283329455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h +rEr+RRd++  ++++L +llP+      +K + a+i+   v+Y+ksLq
  Mapoly0114s0037.1.p 283 EHVIRERQRRDDMSYKIATLERLLPQG-----PKRDRASIVHDSVQYVKSLQ 329
                          699***********************5.....4******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.23279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-13283345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-13283345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.1E-8283329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.88E-9284333No hitNo description
SMARTSM003531.0E-9285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MCPELSQDVS QDHLSRVFYP ESFIYDKFDH QHTLLFNHVP HCAGQYKPPD AQTLDAQGLA  60
AGTHAPLSAA DVGQHGRPSQ AISIEMVAGG GGGGGGSHQA QQSYSVGALA PASAAPTTEA  120
SAEYPPLHIS CSDNQLMPEI DCCGWMKDVL DEFLLTSQDI PRLAPLVPGH SSTINLPSVL  180
SPLGLPSKLE FSASLQASPP PAGNAPQKSS SMSPRSVEAM QTGELAAAAA ATTPKSPPKS  240
KVSSPTPGPL KVRASKRLQR EDSTRKVSKW AQKANLANVD QVEHVIRERQ RRDDMSYKIA  300
TLERLLPQGP KRDRASIVHD SVQYVKSLQQ RVEELTKKSA ELQMMKRSVK FSAPVKVSVE  360
DKRARSPEDS QAPFRLVNFH LQVEGGDEAV TVSNCRCNLD FLSLTMKALE QLQLDLCRSS  420
ITKMPDGAFF CIIACKARVG GAAVPSSAAL ALKLKAAVEL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W5070.0A0A176W507_MARPO; Uncharacterized protein
TrEMBLA0A2R6WBJ60.0A0A2R6WBJ6_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9572213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-11bHLH family protein