PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0098s0046.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 838aa    MW: 91957.5 Da    PI: 6.0954
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0098s0046.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.7e-065906301255
                          HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R ++ N++f+ Lr +l +       K +Ka++L  A+e++++Lq
  Mapoly0098s0046.1.p 590 RTRQENEKFQVLRAMLQPH---ATCKGDKATVLGDAIEHMRDLQ 630
                          77888*************8...89*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.7E-3410181IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000836.88E-8584634No hitNo description
SMARTSM003531.4E-8586635IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.2E-7590638IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-6593638IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2605.4E-5732784No hitNo description
CDDcd048737.35E-9737779No hitNo description
PROSITE profilePS516719.277737815IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    Send to blast
MQGRMSRERE ILQEIVERIG WVYAGLWQPL PPDNSLVGWA DGYYNGPVSE NSEAPLPSSA  60
QWNQRKERRR MVEELQSVPD SRLTDRPDLS NIEWFYLISS KFEFPFGTDG TPGKMLMTGG  120
YEWICDGEEV NGALFSRTAL CKATGMKTVL CLAVSGGVVE IGTTALIDQN LQLVQFVRNM  180
FQRSSGTPKV PISLLSHEQN DDNRDNGLLF NASSATAKFS SPASTNLGMS NPGLPNSSAG  240
RGLGLAPPYQ PNFSNPGPLQ QINSFGLDTI SFAPSLLNGL MREQGPELNL QQAAAAAGSW  300
DLSLEQQLMQ DQNMIPANLK HKLTGPTSAL TKSGSCVASF EQALFHPHAQ HIPQRRALPV  360
ESTGKLLSDF QAQLFNQSQL QQQSSLMQNS AETVVSDSPH HSPVPGQPLP DSLKHAHSPD  420
IHWRSVTHSK GIGSPRRLLT VESGKGLAEV SNIDDPSLKC HQLASPSEES HQHNFTDLIP  480
PSNHGHGQQT QYLAELTGEA HTGQSADHSW SSEAISPTIS EQEQDPEDGY SLWEDTSETL  540
ENGRFLGDSF KHDRSKKARL CGLNMNGHHQ SNGTANGMGS FLDHPHMDER TRQENEKFQV  600
LRAMLQPHAT CKGDKATVLG DAIEHMRDLQ RRVKESESTT TSSASDDGQN PRSLERSSSL  660
TTSLVQGVNH VNLRRDYGHR GIRQQQYGRS GGGDNAPLLK LSDVCLDTNE ELDGVVLAVL  720
DDIPQIEVRM MENERVMIKL SSKDRPNLFT DIMFALQDLH LQVQHANIRT VAGMVHDVFA  780
AKVDVALLEK QSTHTIAEAI RRAIERGNSP NSCSPNPATP DANPNVNSPR KRSLQLT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A2e-171218113192Transcription factor MYC3
4rqw_B2e-171218113192Transcription factor MYC3
4rs9_A2e-171218113192Transcription factor MYC3
4yz6_A2e-171218113192Transcription factor MYC3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WF630.0A0A2R6WF63_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25311123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.12e-24bHLH family protein