 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Mapoly0090s0002.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
|
| Family |
ERF |
| Protein Properties |
Length: 289aa MW: 33140.9 Da PI: 4.2296 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Mapoly0090s0002.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.2 | 3.6e-17 | 6 | 57 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+WvAeI+dp++++k+k+ lg+f+t+eeAa+ ++ +++++g
Mapoly0090s0002.1.p 6 YRGVRKRN-SGKWVAEIWDPRDRKKTKNLLLGTFDTEEEAAEVYDIKALEIFG 57
9****888.8**********998878***********************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MYSKYYRGVR KRNSGKWVAE IWDPRDRKKT KNLLLGTFDT EEEAAEVYDI KALEIFGPNA 60
HLNLQRSRAA AQSNQDTVVM PFFSVPLQTS ISITDSYSQP QVSEISELLK TEALYRDSNS 120
NKTLDSFIPL EVKGVNKIEE LLEVEVPRVT RLDTYFENLD KEPDSEALYR DSNSNKTLDS 180
FIPLEVKGVN KSEELLPLEV EATWLDTYFE NLDKEPDSEA LYRDSNSNKT LDSFIPLEVK 240
GVNKSEELPP LEVEVTPLDT YFENLAKEPD FDFASYLDEI EFKYDGLR*
|
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
