PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0086s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | Trihelix | ||||||||
Protein Properties | Length: 692aa MW: 78635.7 Da PI: 6.2027 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.9 | 1.3e-13 | 62 | 147 | 2 | 85 |
trihelix 2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt e l+L +a+re+ er +g k ++ +W+ v ++++ + ++rs +qCk++we+++ ++kki + ek ++++ ++ q+ Mapoly0086s0081.1.p 62 WTVGECLVLQAAKREDYERQTNGgpkekhKTAAERWQGVEEFCWTHNVQRSGQQCKDRWEKMSADFKKIYDYEKHVSNGQM----HYWQM 147 99**********998888777643433336999*****************************************9766665....44444 PP | |||||||
2 | trihelix | 44 | 5.7e-14 | 258 | 341 | 2 | 79 |
trihelix 2 WtkqevlaLiearr.emeerlrrgk.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt e l+L a+r ++e+++++g ++ +W++v +++++rg+ rs +qC+++w++l+ ++kki + ek++ +++s + Mapoly0086s0081.1.p 258 WTLPESLVLQGAKReDLERQYNSGPkekhlSATERWQAVEEYCWSRGVYRSGQQCRDRWDKLSADFKKISDYEKQNVIGQKSYW 341 99999999998887245556665534455588899***************************************9866655555 PP | |||||||
3 | trihelix | 41.9 | 2.7e-13 | 446 | 525 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrr..gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt +e ++L +a++++ er + +++++ +W++v +++ ++ + rs +qCk++we+++ ++kki + ++ t+++ + + Mapoly0086s0081.1.p 446 WTLEECMVLQAAKQDDFERQAKekNRKAADRWQAVEDFCFRQNVCRSGQQCKDRWEKMSVDFKKIHNYQRHVTDDTANYW 525 *************99988877622457899*************************************9999888777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.586 | 54 | 124 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.2E-9 | 59 | 147 | No hit | No description |
PROSITE profile | PS50090 | 7.166 | 250 | 320 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 2.4E-10 | 255 | 334 | No hit | No description |
PROSITE profile | PS50090 | 7.039 | 438 | 504 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.6E-8 | 444 | 517 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 692 aa Download sequence Send to blast |
MAPDVNNSTA DSGVLTIVNN GNQIPAQPLC VSANLQPVDQ GGGVDGGGGG ARNGRDYKRT 60 NWTVGECLVL QAAKREDYER QTNGGPKEKH KTAAERWQGV EEFCWTHNVQ RSGQQCKDRW 120 EKMSADFKKI YDYEKHVSNG QMHYWQMTLE EKKVKRLPNT FFQEVYNGLS QWFTRGRGAD 180 TANGNQDNLG SLLREPEASA KAGSVGRFSG SDEAESEEAA AEPLLESGSG KRRSTDGDLA 240 SGEREGIANG REYRRTNWTL PESLVLQGAK REDLERQYNS GPKEKHLSAT ERWQAVEEYC 300 WSRGVYRSGQ QCRDRWDKLS ADFKKISDYE KQNVIGQKSY WLMTPEEKKA KRLPSTFWEK 360 LFSSMSDWFG KSRNIDLRVV IHDSSQPQRQ DGDEGFFGTD EDEDGTDPES APVFDSSVDK 420 ERKVDGELLV SAHDEKPGRD YKKTNWTLEE CMVLQAAKQD DFERQAKEKN RKAADRWQAV 480 EDFCFRQNVC RSGQQCKDRW EKMSVDFKKI HNYQRHVTDD TANYWTLTGE EKKSKRLPLT 540 FWQDVFVAMS KWFTKDRNGG SETIAHDSEA QHQEDSGRAG SNKDLSGSDQ GDSDPGSDPF 600 VDSRSRKRRK ASVKINESLA EIMERSNLAT QKILLECEDR KDRRLERTLE ANVRRLERTL 660 EANERIAISY CQAFVSLADA IRSVAATNPQ G* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6WIS7 | 0.0 | A0A2R6WIS7_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1881 | 16 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 6e-25 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0086s0081.1.p |