PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Binding Motif |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Mapoly0083s0040.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Nin-like

Protein Properties

Length: 1149aa MW: 121532 Da PI: 5.5991

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0083s0040.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.7	2.3e-28	678	728	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i l++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Mapoly0083s0040.1.p 678 EKTIGLNVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 728 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.665	661	748	IPR003035	RWP-RK domain
Pfam	PF02042	6.9E-25	681	728	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.09E-20	1040	1127	No hit	No description
Gene3D	G3DSA:3.10.20.240	6.0E-21	1044	1126	No hit	No description
PROSITE profile	PS51745	24.21	1047	1129	IPR000270	PB1 domain
SMART	SM00666	6.0E-22	1047	1129	IPR000270	PB1 domain
CDD	cd06407	7.33E-33	1049	1127	No hit	No description
Pfam	PF00564	4.7E-18	1050	1127	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0010118	Biological Process	stomatal movement
GO:0010167	Biological Process	response to nitrate
GO:0042128	Biological Process	nitrate assimilation
GO:0005634	Cellular Component	nucleus
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1149 aa Download sequence Send to blast
MMEPISNERI QQCLHRWRSA DALGLGQLST SPMAGSPTDS KFIMDDSLLT ELMDLDPLVD 60 QNIEPWINAS SPGEYYPFTT CSPSNVSGPS SLYYTLNQTI PQGYRGGDCY SLPGHSSNIS 120 RIPEGGEDLQ RLVSTNATNS SSSSVSNLAF SKSGAWISND FSPGAYSQDF LPVSPSSLLD 180 RSGCPNQSGN SSEATGVSSS SATADGRGLK HSADVDLSGQ VARDESLGPR GGPSLGGYID 240 SLVYRDSSNG GAEKAEERQD ELLEMLGSGR DLIPADKQEL RGGRFVSQGH ANKGLSQTLK 300 DRMTQALKSI SNLTGGDTLI QIWVPTTHGE KLILSTRDQP YVCAANDNRL FCYRNVSANF 360 VFPTEKGSSE YPGLPGRVFL TRAPEWTPNV LYYSSQEFLR VSYAEQCDVK GTLAVPVFEE 420 TSNICLAVIE LIMKSEKVQY GPELDIICRA LKGVSLSTSG CQSPPTEIRS EERQRTLAEI 480 LEVLTAVCET HKLPLAQTWV PSWTDATPVP ELGSGSPSMN VSPRLSGTVS NKPRVVLHTA 540 HGPCYRVCRS LRTVTSKELD EEQDGSGRVE ALEGKSLNVA NAAFGSKAPD VSPHAQDLED 600 QQGHSGLYDH QHSSEDSLQQ HHMHPSSPQL AHDSNGRSDM DAHHAWRSAG HPYQMPEAGG 660 SGDGVHKRRP ERRRGTNEKT IGLNVLQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGISRW 720 PSRKINKVSR SLKKLQGVID SVQGADGALR INADLASAAA AAAAAVSGVQ LGQDNGYGAR 780 NSWTVSWATP VPGGAAGHSA AGSSDQQQQQ QQQQHLTSSS PPVVDCQMSR GDEAGKGMQQ 840 SWHGKVASPG ASSGGKASQS GDVSSYTVGS SRGVDVDMVG NAGACQASDA AGDEMVEARV 900 DNCGQGEVPN AQNEQSGAGA GAGSVFGTGP KADPAPGKGS FVGGESRVHG GGAALAALQG 960 VNGEEKHLSC SRLGVAGLSS DYRALKIYCG TSPGEEDPEG GNQSSSGVEG SSQHYSSSPV 1020 RVSDCGSPSS GVGSQRRSPN SHDESSSTIV KATYGSDTAR FKLLPNSSYQ DLREEVASRL 1080 KLPVQSLNLK YRDDDEEWVL LVCDADLDEC IEVMRSTGGH AIKLMVRVET VNTSQCGGGS 1140 SSGSTGEQ*

Sequence ? help Back to Top

Protein Sequence Length: 1149 aa Download sequence Send to blast

MMEPISNERI QQCLHRWRSA DALGLGQLST SPMAGSPTDS KFIMDDSLLT ELMDLDPLVD  60
QNIEPWINAS SPGEYYPFTT CSPSNVSGPS SLYYTLNQTI PQGYRGGDCY SLPGHSSNIS  120
RIPEGGEDLQ RLVSTNATNS SSSSVSNLAF SKSGAWISND FSPGAYSQDF LPVSPSSLLD  180
RSGCPNQSGN SSEATGVSSS SATADGRGLK HSADVDLSGQ VARDESLGPR GGPSLGGYID  240
SLVYRDSSNG GAEKAEERQD ELLEMLGSGR DLIPADKQEL RGGRFVSQGH ANKGLSQTLK  300
DRMTQALKSI SNLTGGDTLI QIWVPTTHGE KLILSTRDQP YVCAANDNRL FCYRNVSANF  360
VFPTEKGSSE YPGLPGRVFL TRAPEWTPNV LYYSSQEFLR VSYAEQCDVK GTLAVPVFEE  420
TSNICLAVIE LIMKSEKVQY GPELDIICRA LKGVSLSTSG CQSPPTEIRS EERQRTLAEI  480
LEVLTAVCET HKLPLAQTWV PSWTDATPVP ELGSGSPSMN VSPRLSGTVS NKPRVVLHTA  540
HGPCYRVCRS LRTVTSKELD EEQDGSGRVE ALEGKSLNVA NAAFGSKAPD VSPHAQDLED  600
QQGHSGLYDH QHSSEDSLQQ HHMHPSSPQL AHDSNGRSDM DAHHAWRSAG HPYQMPEAGG  660
SGDGVHKRRP ERRRGTNEKT IGLNVLQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGISRW  720
PSRKINKVSR SLKKLQGVID SVQGADGALR INADLASAAA AAAAAVSGVQ LGQDNGYGAR  780
NSWTVSWATP VPGGAAGHSA AGSSDQQQQQ QQQQHLTSSS PPVVDCQMSR GDEAGKGMQQ  840
SWHGKVASPG ASSGGKASQS GDVSSYTVGS SRGVDVDMVG NAGACQASDA AGDEMVEARV  900
DNCGQGEVPN AQNEQSGAGA GAGSVFGTGP KADPAPGKGS FVGGESRVHG GGAALAALQG  960
VNGEEKHLSC SRLGVAGLSS DYRALKIYCG TSPGEEDPEG GNQSSSGVEG SSQHYSSSPV  1020
RVSDCGSPSS GVGSQRRSPN SHDESSSTIV KATYGSDTAR FKLLPNSSYQ DLREEVASRL  1080
KLPVQSLNLK YRDDDEEWVL LVCDADLDEC IEVMRSTGGH AIKLMVRVET VNTSQCGGGS  1140
SSGSTGEQ*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00449	DAP	Transfer from AT4G24020	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1B1FGW6	0.0	A0A1B1FGW6_MARPO; NLP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP299	16	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	2e-55	NIN like protein 7

Link Out ? help Back to Top
Phytozome	Mapoly0083s0040.1.p