PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0079s0062.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | GRAS | ||||||||
Protein Properties | Length: 80aa MW: 9049.39 Da PI: 6.5082 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 46.3 | 7.1e-15 | 3 | 75 | 251 | 319 |
GRAS 251 esFlerflealeyysalfdsl.eaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerl 319 + Fl rf+ea +y+s+ dsl + l++ s er vEr +lgrei++ v g++r+erh+t+ +W + Mapoly0079s0062.1.p 3 QGFLPRFVEAKHYFSSTVDSLpACLLASLSsslAEREIVERLVLGREICKSVGSDGDQRVERHRTVDRWMLYM 75 68*******************7666666656679***********************************7655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 11.492 | 1 | 79 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 2.3E-12 | 3 | 75 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 80 aa Download sequence Send to blast |
MEQGFLPRFV EAKHYFSSTV DSLPACLLAS LSSSLAEREI VERLVLGREI CKSVGSDGDQ 60 RVERHRTVDR WMLYMGFQL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6WL20 | 5e-51 | A0A2R6WL20_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 8e-10 | GRAS family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0079s0062.1.p |