|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Mapoly0069s0069.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
|
Family |
HD-ZIP |
Protein Properties |
Length: 326aa MW: 36377 Da PI: 7.8714 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Mapoly0069s0069.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 56.8 | 3.7e-18 | 181 | 235 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
Mapoly0069s0069.1.p 181 RKKLRLSKEQSALLEESFKEHSTLNPKQKNALAKQLNLRPRQVEVWFQNRRARTK 235
778899***********************************************98 PP
|
2 | HD-ZIP_I/II | 125.7 | 2.1e-40 | 181 | 270 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rlskeq++lLEesF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+een+rL+ke +eLr +
Mapoly0069s0069.1.p 181 RKKLRLSKEQSALLEESFKEHSTLNPKQKNALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLQKELQELR-A 269
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 l 91
l
Mapoly0069s0069.1.p 270 L 270
5 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MMLLAEGKDR LREEVQRLRA MQGSGASLSL SVDLSMMVAR SQDDCSTVRR QCPVQLDLLP 60 MPTFPSAAAA PHPPTQQSQS QSHNPFPWKP LFNRSRSNSA SGNEDIEAAE TYSSGHGGSP 120 RGIDVNQIPS SADCDDVVVS SPNSINLKRE REKTHDFDLE RDRTCDISSR GSDEEEGGTT 180 RKKLRLSKEQ SALLEESFKE HSTLNPKQKN ALAKQLNLRP RQVEVWFQNR RARTKLKQTE 240 VDCELLKRCC ETLTEENRRL QKELQELRAL KVAPPCVIAH DFYMPLPAAT LTMCPSCERV 300 TTMDNKTLAF AKPGFSHYSQ SSAAC*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 179 | 185 | TRKKLRL |
2 | 229 | 237 | RRARTKLKQ |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |