PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0048s0045.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family AP2
Protein Properties Length: 751aa    MW: 82737.8 Da    PI: 8.3594
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0048s0045.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2262.3e-08287334255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          g++GV +++  + W A Ir+       k  ++g+f t ++A ka++ a+ kl+g
  Mapoly0048s0045.1.p 287 GFPGVQFKEDEQLWQAKIRH------DKENYVGYFTTMNDATKAYDLAAYKLHG 334
                          799*****************......6999**********************98 PP
2AP2353.7e-11376425156
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          sg++GVr    +g W A+   ++   k+ +f+lg+f t+e Aaka++ ++ kl ge
  Mapoly0048s0045.1.p 376 SGCRGVRLTT-SGGWHAS---FTY--KSYYFYLGTFKTKETAAKAYDLFASKLIGE 425
                          79*****888.8******...843..45************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.084193252IPR001471AP2/ERF domain
SMARTSM003807.5E-6199258IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-7225252IPR001471AP2/ERF domain
PROSITE profilePS5103211.258287342IPR001471AP2/ERF domain
SMARTSM003800.015287348IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-8288339IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-6290340IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-10376430IPR016177DNA-binding domain
PROSITE profilePS5103212.009377432IPR001471AP2/ERF domain
PfamPF008471.1E-6377425IPR001471AP2/ERF domain
SMARTSM003802.8E-5379438IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-9379430IPR001471AP2/ERF domain
SMARTSM003802.0E-5550611IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-10550606IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-9550606IPR016177DNA-binding domain
PROSITE profilePS5103213.762550605IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 751 aa     Download sequence    Send to blast
MAPFCAPCTT SAAAARCAAL QFGVGGLVQS SSCCGGSNVA DFRVREGRDG KPRDAMLCSR  60
SAGIYELGGF GRLSLRDGDE FVRTLAAAGT GGVWFRKKRR WKAANSSSAN VICEVSGGIG  120
TETEVFESRV LNVSVSVSSS SSSSPSGSAD AASSNQVVAS ESIFLSSTEK REEDTRGTPE  180
SVLKDSSNIE SDKSQGGTKY FGVQPVRGRF EVELQKDGVV HKLIFLSQEE AARSYDKAAF  240
KLSGRSARLN FDLTEEEKLE IQGTGWEDLL LKMQLQALSE NSPAGLGFPG VQFKEDEQLW  300
QAKIRHDKEN YVGYFTTMND ATKAYDLAAY KLHGSHALLS QPLTASEKKE LATMDWDALV  360
VRLGLEIQAR RIRRNSGCRG VRLTTSGGWH ASFTYKSYYF YLGTFKTKET AAKAYDLFAS  420
KLIGERAKVN TELNPEELAF LSTHSVNSLR EYLAGQAMLA PKQAFLGARG ARMVQGRWEV  480
CLENARKDRI FTSSVSSEVE ALRVHDLAAY KLHNELAKTY QELSQVERQE VEAADWSSVA  540
AKLDLQQLPS YHGVNRLISG MWQSYIRHGG AYLAVGTYDS SEVAARASDM CTYKLEGRNA  600
ILNFPLTELQ RREVEAMDWG KLILSLREMQ IKSDVDEELG DPKSLAMEDV SREKKWTILL  660
CHEQLLQQRM MRRAPKVGRQ LVVGNPSIAA QFSHLNRRPD GSPMLVEEVM DGSNTPLLWN  720
CICGNLFLKA PVGLLKAKHA TCRIAGCRKK *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101KKRRWK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WYI90.0A0A2R6WYI9_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1881122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.17e-10AP2 family protein