PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0035s0146.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bHLH | ||||||||
Protein Properties | Length: 584aa MW: 63122.4 Da PI: 8.7574 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.2 | 1.7e-09 | 338 | 383 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +rEr+RRd++ ++++L +llP+a K + ++i+ ++Y++ Lq Mapoly0035s0146.3.p 338 HVQRERQRRDDMSAKIATLETLLPPA-----SKRDRVSIVHDGIHYVRALQ 383 899**********************9.....79***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.767 | 333 | 382 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.2E-12 | 337 | 401 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.76E-12 | 337 | 400 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.79E-8 | 338 | 387 | No hit | No description |
Pfam | PF00010 | 7.8E-7 | 338 | 383 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-6 | 339 | 388 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 584 aa Download sequence Send to blast |
MSSVVFVAQD ALEYRSRIMS EFSSGAFKPF GSGAQFVLPQ QKFGVRAPAA EDESYQDVKW 60 RVQDNMPMDG DSSDHSGFRS WPDSALSLSS SSSAHASAPC ATFDHFNVNE HENVVVNEMF 120 SSREAPAYEP SMPHSLNLQY LGSSSPAQLD ELYGGYHGGR WQAAPDPNGP CNSSDVLVVV 180 PGNTQDTTKP LTYHLASSNT SCDSSADSFS FQKFSPHSTR LSAASGTLPG SMSGAPLAMA 240 DSLGQNNKAT APFRNSFRPP TADLRRFQAR GRGRGDFRAA ASTSRIEQQM SLGMSSQSLA 300 ANYHQALRVA KTPTDFTLGK RQLNGSRVPD MLSGHLEHVQ RERQRRDDMS AKIATLETLL 360 PPASKRDRVS IVHDGIHYVR ALQEKVKALQ GQLQEAKRRA EAGAQDKKWS CLGSSSNVDF 420 ASSSRNLSSS RAVLNASRTS GRFRLGPMTR TTSTTSFNIG GTQSGRAEFE GSGGFSDSPL 480 LGLTPKSEPL PSRGPISVEL HVQVDRPGEQ VQVVKCECRY SYLSSVMRTL DQLQLSLHRC 540 SVTKLHDYVI CVIVIKPTSN CSTAHAVSSA QIATLLKIAA VDS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A176WD64 | 0.0 | A0A176WD64_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6X5J9 | 0.0 | A0A2R6X5J9_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46510.1 | 3e-10 | ABA-inducible BHLH-type transcription factor |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0035s0146.3.p |