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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0034s0126.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bZIP | ||||||||
Protein Properties | Length: 382aa MW: 40896 Da PI: 9.0321 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43 | 9.8e-14 | 259 | 300 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++++r+ +NRe+ArrsR+RK++ ++eL+ v+ L aeN + Mapoly0034s0126.1.p 259 RKQKRMLSNRESARRSRLRKQQHLDELRAQVAHLRAENNHMM 300 79************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.0E-17 | 255 | 319 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.944 | 257 | 320 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-10 | 259 | 301 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.8E-10 | 259 | 303 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-11 | 259 | 312 | No hit | No description |
CDD | cd14702 | 1.43E-20 | 260 | 310 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 262 | 277 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009845 | Biological Process | seed germination | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence Send to blast |
MVESLGTRRE AEKLKIEKAG RMGAMEQVSG EGDETDGVNS NNKKGEAMMS NTMRRATSVD 60 DLFAPLWQLN VQSSCTPRSN DPPAPYPSAS SAAASSSAKA PAPQAPVPHA SRIAEGGASS 120 SVSSVAVNAE CKERSTNGTS SPPPLSHSSA GSIANDRDSQ RVVAESRVQQ SGKNQPDGVK 180 RTGRDRQLEG SSSSYSSEPD AGDVKPSIIA PEADHYPFGA KRESKGTTGK ASSGDAPDPL 240 PPSNSTSDDD QHAGGVDERK QKRMLSNRES ARRSRLRKQQ HLDELRAQVA HLRAENNHMM 300 TKYSIASQRY VTLTDENQRL RSHAMDLSRQ LQRLHHTASQ HPGGLRALGL QTGHLDPVPF 360 GSMSSGHHSP YSQPMVPDML H* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 271 | 277 | RRSRLRK |
2 | 271 | 278 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00239 | DAP | Transfer from AT1G75390 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A176WS74 | 0.0 | A0A176WS74_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6X638 | 0.0 | A0A2R6X638_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 5e-26 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0034s0126.1.p |