PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0031s0076.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 650aa    MW: 72549 Da    PI: 6.1904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0031s0076.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.6e-12460505454
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           h + Er+RR+++N+++++Lr+l+P++     +K + a+i+  A++ I++L
  Mapoly0031s0076.1.p 460 HHFATERQRREHLNEKYQTLRSLVPNP-----TKADRASIVSDAINRIHDL 505
                          699************************.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-14455521IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.51E-13455510No hitNo description
PROSITE profilePS5088815.421456505IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-12460518IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-10461505IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-11462511IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    Send to blast
MERIEAGVEM SSFNFHGGDF CQSEMGAYAD QEDQDIRAEM QAITDPGLNN VLLGLSDALD  60
TIPRSRYVGL TLGDLPLTNM NGSGSENFNA NRAMSDQQNM ANHDHPPDGL SFPVDASHRQ  120
GENDNHLAMQ EIRMIHQSEL ENEQQQEREQ QHHQHHQHHQ LMTENGPTDA FHEQSSETKN  180
CPGYSYDQKS GGHGFMTAWE ESVKYMEDLR QLQELQAQQQ PRAQPIANRV QPNNDIFSLE  240
NLGGLSAGIQ AFNSFSELEK ISEGHDLKDK LPAEVFNLLQ QPSHSISPSC STGLAFASSS  300
GSVYPSVSNF KRPTGPVNSC HVHVPMPNPH GYQLMDRGTN SSLFGGNGIQ APAVAYPGPF  360
TKLLNYNNVP GGSSRNYSKI FNYNSPAASG PGFFPTDLPP TKSGSNVDLL QLEYGHNEEL  420
QDVFGAAQMT APSHFLPEIP RRTKSASGRL TNEAEQKPLH HFATERQRRE HLNEKYQTLR  480
SLVPNPTKAD RASIVSDAIN RIHDLKKEEE GLMDEKKNRQ LRRQLRLEMR ANGKRQRAEE  540
SETAVKEDGE SLCLKALWSK KVSKHGTEIE VRIVCDEVDI HIRQKHMPRF LIRVITAVER  600
GLKLEILDGT GGVIHNCDVY RFKLKIQGDS CAFMGVIMAK LLEILDTVF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X7M70.0A0A2R6X7M7_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP26591431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.23e-20bHLH family protein