PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0031s0075.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 558aa    MW: 63799.9 Da    PI: 7.277
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0031s0075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08374415854
                          HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           E++RRd i++++ +L++l+P        K + a+i+  +++YI+ L
  Mapoly0031s0075.1.p 374 TEKQRRDFIKERYKTLQSLVPRY-----SKTDRASIVGDTINYIHVL 415
                          6*********************7.....6***************866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.874366415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.5E-8372421IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.19E-12373429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-6374415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-9374429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.98E-7375420No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    Send to blast
MQLQLAARLN NHFPSVHYSQ EGFEQSPSAA QPKNYDCEVS DTSALYLRGD NCSNNDSNHF  60
SELDQLAQRM NTGEGGLQYV RNSIGEKSSL GLSHGHSSQD HGAQCVNLDS EFSQRNKVYS  120
SNHTLASHQQ IIQEPVIIYE FPQEQERPGH LYMMNTYGST CATNIPSQAS KMHNQDYHNI  180
AVQHDFEQDL ALNRLTDLIQ LQGTTFMKEY QPQHVQAHQR HLSLFNNNPS EIRGRSCQGD  240
LQEINRQSTG GEIAAWEGIN KTNEDMFHQQ EQYDQQQAFL NFLRFSNAPH GGSKFSRRDS  300
VDGKSLYRRS KSPEDEHELL ELFDGRSSGS VTVAATAVLH SEASAVNPRT SYDDCVQIRS  360
LPAVEPRMKQ VFRTEKQRRD FIKERYKTLQ SLVPRYSKTD RASIVGDTIN YIHVLRKQIR  420
ELTLKKEKRR ERKIIERSQT TGEGCAESHD ERPRNYERAL SEFRISDENE LRLASKRGAA  480
IKFQLTADEL HVNIVQKREP YFLNRFLASL TRFDLVNSSG GIIDNHHIQS FILKIKGNLR  540
QVSVKLINNI MDTLDQI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1423429LKKEKRR
2424432KKEKRRERK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X7N00.0A0A2R6X7N0_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.22e-09bHLH family protein