PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0031s0072.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 471aa    MW: 51529.6 Da    PI: 5.4659
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0031s0072.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-14268318255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r ah  +Er RR+++N+ f+ L++++P++   + ++l+ a+iL  Av+ +++L+
  Mapoly0031s0072.1.p 268 RNAHIVAERLRRKQMNEHFSALKDIIPSS---YIPRLDQATILAAAVNLVRDLE 318
                          89***************************...9***************999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.602266317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-16267339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.64E-12268322No hitNo description
PfamPF000105.7E-11268318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-16268331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-10272323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010377Biological Processguard cell fate commitment
GO:0045597Biological Processpositive regulation of cell differentiation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051782Biological Processnegative regulation of cell division
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MDGVVLDDGL LQSIFPKKKL NAISIKLNSD DTEDVKFRIS EDHELPRDIE EFLSCPEGGS  60
HIASLMQFMD CSKQQNGVTG KHESGICNPM LSREVSCNKL TMDDEFFEKS QGDRNSHLNP  120
TAQKSSDDSA KPSQAQEGNL GNQPPCDDQG AALDMDGTSA DDLVHFIEQI YSEQEDGDSG  180
STEIIASQNQ AANSGRGTPA VSALGTEDEK QAVEVVGTAG DVFAPSSQVK KRKQKNQACG  240
DVKGVSKKSK TSSYNKKEAN KSYRLAHRNA HIVAERLRRK QMNEHFSALK DIIPSSYIPR  300
LDQATILAAA VNLVRDLEHL VKRLQDQKNQ ASLSVSPCNS SLVAESHSHE SPISTIQSTS  360
ADVPWIDVES GLYGQLHANL KSSAGEVEVQ ITQNDVSVTI YTLRKRKNQV ILLLEVFQDL  420
QLILSHLSIS TDGNQALYKL QAEISMRVNA KVIASRIHES LLNLQFENMG *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X7M80.0A0A2R6X7M8_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.17e-22bHLH family protein