PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0028s0060.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 941aa    MW: 104160 Da    PI: 7.657
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0028s0060.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-09703749354
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          r+h  +ErrRR r N+ ++ Lr+l+P+       +++Ka++L ++++ +k+L
  Mapoly0028s0060.1.p 703 RTHMLAERRRRVRENEHYDALRKLIPPT-----SRMDKATVLAETIKLVKKL 749
                          7899***********************7.....6**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.4E-1515169IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474593.66E-13693758IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.288700749IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-7703749IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-11704758IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-10706755IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 941 aa     Download sequence    Send to blast
MSFMQAEQQP SPWIKDLVHK LKWTYAALWT LNTTDGSRPL IGIDAAHTVA EWKDGWYNSD  60
SNRLTRALSG NENVVRDDSR IEALFYSTYK SCSFQQGFGY VGLVLLKRES TWLTGSQEVL  120
EHAFHTQALF LKTARIQTVM CTPWNNHVLE LGKFEQESRN ENVLHQIQRW LSSVTTPLNI  180
QPSPGAVGSE NDSGGSREAM QMSPSIASSM FADGSNCNVH FGPSSDILLK RNNSGQGSGA  240
GGFSVSGHEN ASASSGAPGA GSRVQVQVQV RKKNGLGRYP PHSHDAISLL NRHNQDVLSQ  300
RRSISGQEKT LEASSFVEEW GPAAAGTSSI FQQVVGHDSD PIISCSGMGI PGISSLMPPD  360
TFSQQQQQQQ RSHPRGAASI SLDQALLTSL PMTMATDISA SLALPMDMLQ DSAANLYGLH  420
SKNSREWPTL EPSKEQSLVQ MLEEFTDDDH LQRLQSPDHA LIQTAVASSS DTMAEWASTG  480
TASISHQQQH HRHYDHHTQQ RLQQQQRQQQ QQQQQRVVQR QFEFPNNPAV SSLQNMTTPR  540
PALANLISHQ QHQHQPQQHR PQLVPHGGGQ QPQLLPLGQQ QQQQQVNQPG PPSWQQNISF  600
TTPTAWVRWV SRKQASLLRY KARDPNGASP AALRVNQMVL KRLLTEMVPK IAKEQKAREQ  660
EAGQALDTET SSHGHRVRMI SYPTTTSTKP SESGTLIQDP QARTHMLAER RRRVRENEHY  720
DALRKLIPPT SRMDKATVLA ETIKLVKKLR RRVGQLEKGN PDNSGTPNLS LVTSEDSQIG  780
TTSPSSRGEP GSPIPARTGA GSSEPELQEG KPPGGRFLDS CLVPAPAPSQ EDNKEIVEVD  840
RRACIPTELR AKIRTSHRPD TVIHILTCLK DLGLEVLSTN ISIEKDWVYA DFQLKMNEVH  900
ICRVSQFCEE LQEAIRKAIF PAESSNADST LDGRSHSQDS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X9G50.0A0A2R6X9G5_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.19e-11bHLH family protein