PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0028s0060.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bHLH | ||||||||
Protein Properties | Length: 941aa MW: 104160 Da PI: 7.657 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.8 | 4.6e-09 | 703 | 749 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h +ErrRR r N+ ++ Lr+l+P+ +++Ka++L ++++ +k+L Mapoly0028s0060.1.p 703 RTHMLAERRRRVRENEHYDALRKLIPPT-----SRMDKATVLAETIKLVKKL 749 7899***********************7.....6**************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14215 | 2.4E-15 | 15 | 169 | IPR025610 | Transcription factor MYC/MYB N-terminal |
SuperFamily | SSF47459 | 3.66E-13 | 693 | 758 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.288 | 700 | 749 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.8E-7 | 703 | 749 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-11 | 704 | 758 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-10 | 706 | 755 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 941 aa Download sequence Send to blast |
MSFMQAEQQP SPWIKDLVHK LKWTYAALWT LNTTDGSRPL IGIDAAHTVA EWKDGWYNSD 60 SNRLTRALSG NENVVRDDSR IEALFYSTYK SCSFQQGFGY VGLVLLKRES TWLTGSQEVL 120 EHAFHTQALF LKTARIQTVM CTPWNNHVLE LGKFEQESRN ENVLHQIQRW LSSVTTPLNI 180 QPSPGAVGSE NDSGGSREAM QMSPSIASSM FADGSNCNVH FGPSSDILLK RNNSGQGSGA 240 GGFSVSGHEN ASASSGAPGA GSRVQVQVQV RKKNGLGRYP PHSHDAISLL NRHNQDVLSQ 300 RRSISGQEKT LEASSFVEEW GPAAAGTSSI FQQVVGHDSD PIISCSGMGI PGISSLMPPD 360 TFSQQQQQQQ RSHPRGAASI SLDQALLTSL PMTMATDISA SLALPMDMLQ DSAANLYGLH 420 SKNSREWPTL EPSKEQSLVQ MLEEFTDDDH LQRLQSPDHA LIQTAVASSS DTMAEWASTG 480 TASISHQQQH HRHYDHHTQQ RLQQQQRQQQ QQQQQRVVQR QFEFPNNPAV SSLQNMTTPR 540 PALANLISHQ QHQHQPQQHR PQLVPHGGGQ QPQLLPLGQQ QQQQQVNQPG PPSWQQNISF 600 TTPTAWVRWV SRKQASLLRY KARDPNGASP AALRVNQMVL KRLLTEMVPK IAKEQKAREQ 660 EAGQALDTET SSHGHRVRMI SYPTTTSTKP SESGTLIQDP QARTHMLAER RRRVRENEHY 720 DALRKLIPPT SRMDKATVLA ETIKLVKKLR RRVGQLEKGN PDNSGTPNLS LVTSEDSQIG 780 TTSPSSRGEP GSPIPARTGA GSSEPELQEG KPPGGRFLDS CLVPAPAPSQ EDNKEIVEVD 840 RRACIPTELR AKIRTSHRPD TVIHILTCLK DLGLEVLSTN ISIEKDWVYA DFQLKMNEVH 900 ICRVSQFCEE LQEAIRKAIF PAESSNADST LDGRSHSQDS * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6X9G5 | 0.0 | A0A2R6X9G5_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 9e-11 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0028s0060.1.p |