PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0024s0106.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 623aa    MW: 66795 Da    PI: 6.5027
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0024s0106.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.54.1e-07471512955
                          HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                           r RR++i ++   L +l+P  +      K++ a++L +A+eY+k Lq
  Mapoly0024s0106.1.p 471 ARHRRKKISERVRVLEKLIPGgN------KMDTASMLDEAIEYVKFLQ 512
                          699*****************955......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.09E-8455515No hitNo description
PROSITE profilePS5088814.107462511IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-13466521IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.9E-10468517IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-11468519IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-4472512IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    Send to blast
MEYQPYGLQE IVVDAPYFEE RGFGSFGHLG GESNHLHLPM AISQWSTTDP AIFQVNDQAA  60
WNSNRVRTHF QPTGTAGGLY DMCVQSSTSS QHVVNVAQSN NCQQLISMDT QQVQPHATGP  120
VNSSGDPNFP VGGDILPLMH QMLFNHFMIQ DHRCTGDQMP QLISDFSAQQ PCLYSSSSEC  180
LHDADSSGSS GARDYAFPSS AITGCSSEEI NWRNSDVVHG NFAASSAGFH IEELYDESSS  240
VPAIGQVDMA DSNGHGQSSP LSLVMQRNNA NPLIRRTPNV SWAMTGAESD SSAAAMTVNH  300
CSTLDPLLNV ASFQDISPSP CPPPYKRARL SYNSASAVEP NSSSMLSIPP ASNTAASTTV  360
GTSRPLVSSS GSSFGHHRNM VAVGSSDYPM TTLNVADALY RDLHFPNRQQ LSASSLHHQQ  420
PSSCIIQEIS TGGAVRYVSR KDSALVDHDM SRATSNRKHN ATSIEPQSVA ARHRRKKISE  480
RVRVLEKLIP GGNKMDTASM LDEAIEYVKF LQLQVGLLEK LGELPDGTNV NNHGGNRSQM  540
QQGSTSSCLI TNGTSGGGAG VSSSNYHGSS NVSRPTPTMP ARPTTSPLIL SEILQQQLFK  600
QKLCLVSIRQ YPSGGSPSGS YA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XBW70.0A0A2R6XBW7_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1676923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.14e-21bHLH family protein