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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0022s0095.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bZIP | ||||||||
Protein Properties | Length: 443aa MW: 49412.7 Da PI: 6.3222 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.4 | 9.8e-11 | 200 | 247 | 2 | 49 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ k+ +r+++NRe+A+ sR+RKk +++eLe + Le+ + L++++ Mapoly0022s0095.1.p 200 EDTKKRIRLMRNRESATQSRLRKKSYVKELEMRYRMLESHCSILQQTV 247 6889*********************************99888777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-10 | 199 | 263 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.1E-13 | 199 | 263 | No hit | No description |
PROSITE profile | PS50217 | 9.944 | 201 | 264 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.7E-8 | 201 | 250 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-11 | 203 | 260 | No hit | No description |
CDD | cd14704 | 1.45E-14 | 204 | 254 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 207 | 221 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 443 aa Download sequence Send to blast |
MEVTNELPCR ELDLSLEDVL ELFVDSEEPF DSEPWDFSQS LLPPSPGFFS FDEANGWEIK 60 DRSEICPESG GCESLEATQI IASDEFLVDD GRLGVSSPVS CSGAELGSNL VATSQVETRP 120 YCSNSSEGTS HSELNQGALD LGRSNSNLHC DSFLELKSLS PESGCTSSDE QVQGRSCNNC 180 PTQSGDATAS GEDVTGTVDE DTKKRIRLMR NRESATQSRL RKKSYVKELE MRYRMLESHC 240 SILQQTVAFT SQENILLKEE LNKIKCSNLN GSKSGVVEPA ALPSDSLPSE SPPCLTASAP 300 FRLDNWELLA CLYHVLLLTL LETKAQSRAR RGDGERRPWV RIRRCQVLWL SPILINLVSL 360 GRLRSQMMSV TRKLSYFSTR AKRRNLLDIT HIKSQFSTCV RQHQHCAKSS KKLRKSGRHP 420 RRTQSDYSVW GEIAMRGLVF FP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6XD14 | 0.0 | A0A2R6XD14_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5468 | 15 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 2e-12 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0022s0095.1.p |