PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0021s0101.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 373aa    MW: 41586.7 Da    PI: 9.3404
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0021s0101.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-051972361054
                          HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          + RR++  + +  L++l+P +      K + a+iLe+++ ++k+L
  Mapoly0021s0101.1.p 197 KLRREETAENYKILKSLIPRP-----IKADRASILEETIAHVKNL 236
                          67******************9.....69**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.864187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.15E-4197236No hitNo description
Gene3DG3DSA:4.10.280.101.1E-5197253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-6197262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MNYASIFEEH AAHTPAAMPT MRTPGTYLRT DSVVVPGGQI AHFKDIMEHS SVRTTEFTPI  60
QGTMVRISSQ ESSLPPSAQL TRLQNSQGEA VRENSFPPLG AMNALMKTAS DNSYEGMTHA  120
QEILCRPKPV LSGPSFAKVG SRWRLNSSPI PVSPSPSDLA SSLNMDNTKI DIPPKKRTAS  180
RRSKFDPPYV YKCVKGKLRR EETAENYKIL KSLIPRPIKA DRASILEETI AHVKNLGDQK  240
ASLEKIKHEK LKELCQQRAE KGQCQEWEMS GEANCLWMKR TSRGGTQVDI RIVQNEISVS  300
VVQKHLPRFL LRMVTALESK LKLEILNVTG HVIDDFDVYN FRVEIKGSSC PQANEIMANI  360
METLDSVFLN HG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XDR30.0A0A2R6XDR3_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.21e-14bHLH family protein