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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0015s0121.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | Trihelix | ||||||||
Protein Properties | Length: 380aa MW: 43007.4 Da PI: 5.0383 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 30.3 | 1.1e-09 | 54 | 141 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt+ v + ++ e+ ++++ ++l++++W ev + + e+g + kqC++k++ l+kr++++k++ + + + s+++++ ++ Mapoly0015s0121.1.p 54 EWTDVAVATFLDCFAEKYSNVKHKNLRGKDWMEVVDGLnkrcaPEGGPYYEYKQCRNKLDGLKKRFRQEKDSLSTN--SHPSRWQWYPRM 141 5*********************************9999999998999999************************85..66678****998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.8E-15 | 53 | 144 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MEETGEVAAL QQQEEEEQQQ QQEPQQQPCP TDTMSFQDLV NSADVKTPGQ GAAEWTDVAV 60 ATFLDCFAEK YSNVKHKNLR GKDWMEVVDG LNKRCAPEGG PYYEYKQCRN KLDGLKKRFR 120 QEKDSLSTNS HPSRWQWYPR MCDLKWARNM KMIEHGGGSG RVDKPEMSGD QAEGDGLVPD 180 EKDLNAGDRA GEVSMEDDAA WNKFRLVSTF PPKQKRKRRR AYVFNPSVPE IVAEGSRTRA 240 DLLPPCTPDN MSTLPDRPPL MQQFQKMPST DRTFKLRIRR PNETDCDDIF HFTGETVSDM 300 IESFKAVYWE EPATQIRVQL KEKFTEVWVT VAPSVSLSQY GSEALIITKP RGAYMPLTST 360 MASAPVMDKA LTACESVDP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 213 | 219 | QKRKRRR |
2 | 214 | 219 | KRKRRR |
3 | 215 | 219 | RKRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6XGS4 | 0.0 | A0A2R6XGS4_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP487 | 16 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.2 | 3e-17 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0015s0121.1.p |