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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Mapoly0006s0226.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family |
MYB |
Protein Properties |
Length: 450aa MW: 48853.8 Da PI: 6.4459 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Mapoly0006s0226.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54 | 3.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd++l d++ ++G g+W+t ++ g+ R++k+c++rw +yl
Mapoly0006s0226.1.p 14 RGPWTREEDLKLTDYISKHGEGCWRTLPKNAGLLRCGKSCRLRWINYL 61
89******************************99************97 PP
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2 | Myb_DNA-binding | 50.9 | 3.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ ++eEd l++ ++ +lG++ W++Ia +++ gRt++++k++w+++l
Mapoly0006s0226.1.p 67 RGNISEEEDNLIITLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112
7899******************.*********.************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0010224 | Biological Process | response to UV-B |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0090378 | Biological Process | seed trichome elongation |
GO:1903086 | Biological Process | negative regulation of sinapate ester biosynthetic process |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 450 aa
Download sequence Send
to blast |
MGRAPCCEKV GLNRGPWTRE EDLKLTDYIS KHGEGCWRTL PKNAGLLRCG KSCRLRWINY 60 LRPDLKRGNI SEEEDNLIIT LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLKKKLRSMG 120 IDPNSHRPLS QAAMAVGSHI SQESNVSPCC TLAPQQQIAA IKPNCKTFQS LSMAHQAELN 180 GAMMPQCIMK DESYQTMALV ESFLRDNTVY AESQALPQLR EHCSAATGGG CGGGGGGGGG 240 GAAATAPISH RSNYMSLDKS ESLSMLSPCS PVSILQHCSL STDREKSPSS QALTDFTTSH 300 SDFDHKQALG GMTFGESPSL TSESTASSGF LQVDRGTPTS YEPVPAAAAW GAQLSTSLPL 360 VNSLDMSADH RKRYQEATDI SSTNCPNFQK MLFNEDVLSP WDMEILQPLG DSLGDHAEMD 420 PNAFHCSSNN PATLWDSEMT HSNQLPTAF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 2e-29 | 12 | 116 | 5 | 108 | B-MYB |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |