PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0005s0077.9.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family GATA
Protein Properties Length: 565aa    MW: 64420.2 Da    PI: 7.9561
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0005s0077.9.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA26.96.7e-095889132
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32
                         C+ Cg+ + +l Rrgp g++tLC++CG+++ +
  Mapoly0005s0077.9.p 58 CADCGSGEKKLTRRGPLGPRTLCSPCGVKWVS 89
                         9****************************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004014.7E-452104IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.104.7E-55695IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    Send to blast
MISVCSKVDD SFKNSMDRAE RRQRRLDQKN WGGGVYAGKK RDASKGHDES VDQRATKCAD  60
CGSGEKKLTR RGPLGPRTLC SPCGVKWVSE KKARNAIRNL QDTSSEGESV EDIGQDRGAD  120
MYIKDLERKL RDLKSEHQNL QNALHVSDAS VTTFRKLNDQ RQHKIDELET LVESLTAKIK  180
EISSPLSGSA SGAEAECVRL RSEVRKLEDK LRTDVRNLED RNRQLVENME LMSELLSKNF  240
SAGKEILAQS LLINGDHNTR SRRSGVVTDQ QQQTGHYQES KKASNVVKNK YDVPPGFEVD  300
ADVDVDADIG DNEPEYHVLR RERRRSPRKV LEDPVPCSNG SRGTGGDRDR RDLGWNRDQD  360
WERLYHGESP DLVRERRREE VRGNKKDAEV RLEKAGGGKQ YGSCSGEDKS LRPLVTYDAL  420
PLARQHVEQT FITWLNSKLR KPTEEEMEYH KTQFSTNGKT CYWSGIPGSE LLAQYEEACP  480
LKQAPDKEAL ELVLRTILHV EACPMRPNDV LWCLVWQDCM KIEHLPGYHD MDVARIKREM  540
RRPRSPVVGV EESDRSLRQR FTYC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XQV80.0A0A2R6XQV8_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.19e-08GATA transcription factor 16