PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0005s0077.5.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family GATA
Protein Properties Length: 571aa    MW: 64926.7 Da    PI: 7.8092
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0005s0077.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA26.96.8e-096495132
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32
                         C+ Cg+ + +l Rrgp g++tLC++CG+++ +
  Mapoly0005s0077.5.p 64 CADCGSGEKKLTRRGPLGPRTLCSPCGVKWVS 95
                         9****************************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004014.7E-458110IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.104.7E-562101IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MAYASGAADV CSKVDDSFKN SMDRAERRQR RLDQKNWGGG VYAGKKRDAS KGHDESVDQR  60
ATKCADCGSG EKKLTRRGPL GPRTLCSPCG VKWVSEKKAR NAIRNLQDTS SEGESVEDIG  120
QDRGADMYIK DLERKLRDLK SEHQNLQNAL HVSDASVTTF RKLNDQRQHK IDELETLVES  180
LTAKIKEISS PLSGSASGAE AECVRLRSEV RKLEDKLRTD VRNLEDRNRQ LVENMELMSE  240
LLSKNFSAGK EILAQSLLIN GDHNTRSRRS GVVTDQQQQT GHYQESKKAS NVVKNKYDVP  300
PGFEVDADVD VDADIGDNEP EYHVLRRERR RSPRKVLEDP VPCSNGSRGT GGDRDRRDLG  360
WNRDQDWERL YHGESPDLVR ERRREEVRGN KKDAEVRLEK AGGGKQYGSC SGEDKSLRPL  420
VTYDALPLAR QHVEQTFITW LNSKLRKPTE EEMEYHKTQF STNGKTCYWS GIPGSELLAQ  480
YEEACPLKQA PDKEALELVL RTILHVEACP MRPNDVLWCL VWQDCMKIEH LPGYHDMDVA  540
RIKREMRRPR SPVVGVEESD RSLRQRFTYC *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XQQ20.0A0A2R6XQQ2_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.19e-08GATA transcription factor 16