PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0002s0172.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 270aa MW: 30781.4 Da PI: 6.9456

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0002s0172.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.9	1.3e-13	14	88	2	76
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 W+ e l+L +a+re +++ + + +k +W ++ ++++e+ ++rs +qCk++w ++ ++kk+ e ++ s++ Mapoly0002s0172.1.p 14 WSVTECLVLQAAKREENDKHDKHRGAKEKWLAIEDYCWEHDVHRSGQQCKDRWYRMALEFKKVYEYQRAIPSGKP 88 ***************************************************************999988654444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.864	10	70	IPR017877	Myb-like domain
Pfam	PF13837	2.5E-9	12	93	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MEEREGRVYK KTNWSVTECL VLQAAKREEN DKHDKHRGAK EKWLAIEDYC WEHDVHRSGQ 60 QCKDRWYRMA LEFKKVYEYQ RAIPSGKPSF WQLSGSERKE ARLPIVFHQE IYDAMVDWYL 120 NSKPGNGNLV IDTSVPSPAD EGHHDASNGN CSGTDEGESD DRSGHSMGNK NKRRKTIAKA 180 ALSLASMVER SGDVTSKALL ECEDRKDQRL EKQLEFNERL AVRQLEANER LALKQMDANE 240 RIASGYINAI INLADALRSL STPRSAEPQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6XUB6	0.0	A0A2R6XUB6_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1881	16	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-17	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0002s0172.1.p