PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.S035900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 26042.3 Da PI: 9.6322 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.7 | 3.1e-42 | 29 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 lp+G+rF P+d+el+ +yL +k+++++l+ + i+ vd+y++ P++L + k++ +e++wyfF++r+kky++g+r++r a + gyWkatg+ Manes.S035900.1.p 29 LPVGYRFAPSDDELIRYYLLRKINNEHLPP-NRIHVVDLYNYSPQQLAEtyKLNReRESQWYFFTSREKKYPKGSRPKRnARELGYWKATGT 119 799************************999.77**************842333332556********************77779******** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 dk++l+ +++ g +k+L +y++r+++g+kt+W mhey l Manes.S035900.1.p 120 DKAILD-GKKPLGFRKSLDYYEERQRDGTKTNWKMHEYLL 158 ******.999****************************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.27E-50 | 24 | 189 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 47.63 | 29 | 190 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-23 | 30 | 157 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MEQNQNKNKG VAADCSTSSD DVERYFNSLP VGYRFAPSDD ELIRYYLLRK INNEHLPPNR 60 IHVVDLYNYS PQQLAETYKL NRERESQWYF FTSREKKYPK GSRPKRNARE LGYWKATGTD 120 KAILDGKKPL GFRKSLDYYE ERQRDGTKTN WKMHEYLLHQ SLVPSGATAR GKNPLQPKQD 180 EWVLCKIYNN KAEGKKNKND KDGGTVNAET EIPLHSLYCV IIL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-38 | 21 | 196 | 8 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.S035900.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021602430.1 | 1e-167 | NAC transcription factor 29-like | ||||
TrEMBL | A0A199UBM9 | 1e-166 | A0A199UBM9_MANES; Uncharacterized protein | ||||
STRING | EOY09270 | 4e-55 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15078 | 7 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-42 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Manes.S035900.1.p |