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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.S015700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 220aa MW: 24459.1 Da PI: 8.6812 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.6 | 3.2e-12 | 1 | 28 | 102 | 129 |
NAM 102 lkktLvfykgrapkgektdWvmheyrle 129 +kktLvfykgrap+gek++Wvmheyrle Manes.S015700.1.p 1 MKKTLVFYKGRAPRGEKSNWVMHEYRLE 28 8*************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02365 | 6.6E-5 | 1 | 27 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.14E-16 | 1 | 48 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.639 | 1 | 48 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MKKTLVFYKG RAPRGEKSNW VMHEYRLENK HPFKRTKEEW VVCRVFQKSS AAKKPQQTQS 60 SQQSLGSPCD TNSIVNEFGD IELPNLNNNV NSSNEFNNIS TQSNYSNQAN VDMNINVQNW 120 ASPSLSWPSS LLSPNLAINS LLLKALQLRS YQQREAAAAA ANAASSSDHY SFLTQGTSIP 180 QFGTDLNSNV QGSSSSSRVL ETVQQPVQQE QPFILDSIW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.S015700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KR605214 | 0.0 | KR605214.1 Manihot esculenta NAC transcription factors 76 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021602139.1 | 1e-158 | NAC domain-containing protein 100 | ||||
TrEMBL | A0A199UCA0 | 1e-159 | A0A199UCA0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_029418m | 1e-157 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4946 | 33 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 1e-30 | NAC domain containing protein 58 |
Link Out ? help Back to Top | |
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Phytozome | Manes.S015700.1.p |
Publications ? help Back to Top | |||
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