PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.18G104700.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 27468.7 Da PI: 8.4454 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.5 | 1.8e-06 | 218 | 241 | 6 | 29 |
HHHHHHHHHHHHHHHHHHHCTSCC CS HLH 6 nerErrRRdriNsafeeLrellPk 29 +++Er RR ri +++ +L+el+P+ Manes.18G104700.2.p 218 SIAERVRRTRISDRIRKLQELVPN 241 689********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.407 | 212 | 250 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.37E-6 | 215 | 244 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.9E-5 | 217 | 243 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
FRFPLNKQRS SQLNSLRKRM QPTPLVSGNS SRGGGGGSEL IGSGLARFRS APATWLEALL 60 EDEEEEDPLK PNRTLTQLLA SNNPTRNSVP LASSSSLSSS FLSGNLFEPT GFQRQNSSPA 120 DFLGDSGPGS DGYFSSFGIP SNYDYISPMD VSPSGEKARE VELHHPSTKY PSLLKGEQSG 180 RVAGEVSTLM EMEIEKLLED SVPYRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQELVP 240 NMDKVEGELL * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.18G104700.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021600984.1 | 1e-166 | transcription factor bHLH80-like isoform X2 | ||||
Swissprot | Q9C8P8 | 6e-67 | BH080_ARATH; Transcription factor bHLH80 | ||||
TrEMBL | A0A2C9U359 | 1e-180 | A0A2C9U359_MANES; Uncharacterized protein (Fragment) | ||||
STRING | cassava4.1_020939m | 1e-161 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 2e-53 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.18G104700.2.p |