PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.18G079600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 289aa MW: 33276.9 Da PI: 9.1136 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 118.7 | 5.5e-37 | 38 | 132 | 32 | 128 |
NAM 32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121 +i+e+d+yk++PwdLp + +ek+wyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + vg+kk Lvfy g+apkg+kt+W Manes.18G079600.1.p 38 PIIAEIDLYKYDPWDLPGLALYGEKDWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGL--PKPVGIKKALVFYAGKAPKGVKTNW 125 369**************65556799************************************99..789********************** PP NAM 122 vmheyrl 128 +mheyrl Manes.18G079600.1.p 126 IMHEYRL 132 *****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 45.919 | 3 | 158 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.84E-46 | 33 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-15 | 50 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MKLFRKIYYF KLNETSVYQR LDERIIRIST LIFRCHVPII AEIDLYKYDP WDLPGLALYG 60 EKDWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGL PKPVGIKKAL VFYAGKAPKG 120 VKTNWIMHEY RLADVDRSVR KKNSLRLDDW VLCRIYNKKG TIEKQGQVSN RKLNSPEIME 180 DTKPDIRAPF PDPSSATGTA NDYVYFDTSD SVPKLHTDSS CSEHVVSPEF TCEVQSEPKW 240 KDWGDVNALD FSYNYMDASL DKTFASLFQG NNQMSPLQDM FMNLQKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-61 | 34 | 164 | 41 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.18G079600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF017566 | 0.0 | KF017566.1 Hevea brasiliensis NAC transcription factor (NAC3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021649171.1 | 1e-167 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-127 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2C9U2C3 | 0.0 | A0A2C9U2C3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_013132m | 1e-165 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-130 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.18G079600.1.p |