 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Manes.18G051600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 265aa MW: 29496.3 Da PI: 8.1043 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.18G051600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.2 | 1.4e-18 | 119 | 173 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k
Manes.18G051600.1.p 119 RKKLRLNKQQSATLENSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTK 173
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 122.2 | 2.6e-39 | 119 | 207 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+k+q+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eL+ +
Manes.18G051600.1.p 119 RKKLRLNKQQSATLENSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTKLKQTEVDCEVLKKCCETLTEENKRLQKELQELK-S 207
69*************************************************************************************9.4 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MGFGISDGVC NTGLGLALSC HDKQQHCSQS DHHLQQKKQK LSLKYDHMFP SLTLGLPQEP 60
YPSAAKVEAD FQPQASSPSA VSSFSNSSVK KEREFCGEEA EVERVSSRVS DEDEEGSPRK 120
KLRLNKQQSA TLENSFKEHS TLNPKQKQAL AEQLNLRPRQ VEVWFQNRRA RTKLKQTEVD 180
CEVLKKCCET LTEENKRLQK ELQELKSLKL TAPLYMQLPA ATLTICPSCE RINSGDASST 240
TTTTLTVGPK PHFYSPFTHP SAAC*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 167 | 175 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
