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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Manes.18G018200.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
SRS |
| Protein Properties |
Length: 324aa MW: 35974.9 Da PI: 8.7663 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.18G018200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 226.3 | 6e-70 | 89 | 245 | 4 | 153 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..........aeaaskrkrelkskkq 83
g+++CqdCGnqakkdCah RCRtCCksrgf+C+thvkstWvpaakrrerqqqlaa+++++++++ + +++kr re ++ +
Manes.18G018200.1.p 89 GGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQQEQQQQQhnqeqqqlqfRGENPKRLRE-NQGGA 177
789****************************************************99988887755554443333333333333.34455 PP
DUF702 84 salsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
s+l++t+l+ ++++ le++++P+ev+s+avfrcvrvs++d+ +e++aYqtav+igGhvf+G+LydqG++
Manes.18G018200.1.p 178 SSLACTRLA--TTTSGLEVAHFPPEVNSTAVFRCVRVSAMDEPDEQYAYQTAVNIGGHVFRGVLYDQGPD 245
556666655..55667999*************************************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MAGWFYLSGR EGATSKQEEE KEQHNNLFLY RSNEEIYNKG FEIWPQYYQQ QQNMNSYSSF 60
GVGPSRRSFS DESSRSGFTV MRQGGIGGGG MNCQDCGNQA KKDCAHLRCR TCCKSRGFQC 120
QTHVKSTWVP AAKRRERQQQ LAALQQEQQQ QQHNQEQQQL QFRGENPKRL RENQGGASSL 180
ACTRLATTTS GLEVAHFPPE VNSTAVFRCV RVSAMDEPDE QYAYQTAVNI GGHVFRGVLY 240
DQGPDGRYTS GGESSSGGVQ QLNLITAATT SPAATTTNAS NPGTGALLDP SLYPAPLNAF 300
IAVFFKFNMH PMKLKRSKIE HRN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:16740146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP011966 | 0.0 | AP011966.1 Jatropha curcas DNA, clone: JHL18I08, complete sequence. |
