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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.18G002500.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 27951.7 Da PI: 6.8867 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.2 | 2.1e-12 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kktLvfykgrap+gekt+Wvmheyrl Manes.18G002500.2.p 1 MKKTLVFYKGRAPRGEKTKWVMHEYRL 27 8************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.53E-16 | 1 | 49 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.315 | 1 | 49 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-5 | 1 | 27 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MKKTLVFYKG RAPRGEKTKW VMHEYRLDGD FSYRHTCKEE WVICRIFHKT GEKKNGLVHG 60 QGFVLEVSSP PISCSLPPLL EAPSTLVKCQ DQAPTEVLQN HFLIHHQEAS ITKNTRETNK 120 NVHTDTNTNG ASPSMLFKSP VSHQDCTLKE QSNIPKQCKT EANFSYFQLP DPNSNMNWVD 180 KVHPSPCIQY PLSCEMDCNV LGISAAATDS DITAYEMSTS IAFNGAGFQM MMLDTPIRHP 240 AESWQLDS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.18G002500.2.p |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KR605188 | 0.0 | KR605188.1 Manihot esculenta NAC transcription factors 50 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021600114.1 | 0.0 | NAC domain-containing protein 79-like isoform X2 | ||||
TrEMBL | A0A2C9U0R1 | 0.0 | A0A2C9U0R1_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_023225m | 1e-180 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 1e-30 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.18G002500.2.p |
Publications ? help Back to Top | |||
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