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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.17G077200.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 237aa MW: 26086.6 Da PI: 8.8601 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.17G077200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.2e-19 | 71 | 125 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq + Lee F+ +++++ +++e LA++l+L+ rqV vWFqNrRa+ k
Manes.17G077200.1.p 71 RKKLRLSKEQSRLLEESFRHHHTLNPRQKEALAMQLKLKPRQVEVWFQNRRARSK 125
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 119 | 2.6e-38 | 71 | 159 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rlskeq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+
Manes.17G077200.1.p 71 RKKLRLSKEQSRLLEESFRHHHTLNPRQKEALAMQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 159
69*************************************************************************************94 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MAVSPTSSSS LELTISMPGF SSSLSLPSSA GEGGCGVRDL DINQVPSTAV EEWITASMDD 60
DEEITNGAPP RKKLRLSKEQ SRLLEESFRH HHTLNPRQKE ALAMQLKLKP RQVEVWFQNR 120
RARSKLKQTE MECEYLKRWF GSLTEQNRRL QREVEELRAM KVGPPTVISP HSCEPLPAST 180
LTMCPSCERV TTTVTIDKAP TRTTTTTNGT TRATAATLSS KVGTPLLQSR QSSAAC*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 119 | 127 | RRARSKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
