 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.17G056000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
Trihelix |
| Protein Properties |
Length: 288aa MW: 32853.6 Da PI: 5.8817 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.17G056000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 50.9 | 4.1e-16 | 25 | 115 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
+W+++ + +L+e+ ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk +k++ + + + +s++p+f++l
Manes.17G056000.1.p 25 CWSEEATSTLVEVWGKRYLELNRGNLRQKDWQEVADAVnakhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVTSSNGTLTSSWPFFESL 114
7**************************************999999999*************************999888899******99 PP
trihelix 86 e 86
+
Manes.17G056000.1.p 115 D 115
7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MGDLTDTLTP STTPHSRPLP IREDCWSEEA TSTLVEVWGK RYLELNRGNL RQKDWQEVAD 60
AVNAKHGHTK KTHRTDVQCK NRIDTIKKKY KIEKARVTSS NGTLTSSWPF FESLDTLIGS 120
NFTAKKQAPP SPPVALPLTS YRRTPSSTPP TAAVALPQKR PLDDGYFRRN YSAMAAAAAA 180
AAESESEEEL EEEEEEGGRE RERERENEED EEGEGIRRLA QAIERFGEAY ERVESEKLRQ 240
MLDLEKQRMK FAKDLEMERM RIFTETQIQL EKIKKGKRSG SNGERDY*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT3G58630.1 | 5e-43 | sequence-specific DNA binding transcription factors |
