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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.16G137900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
Trihelix |
Protein Properties |
Length: 325aa MW: 36863.8 Da PI: 5.3804 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.16G137900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 36.1 | 1.7e-11 | 45 | 118 | 2 | 76 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76
Wt +e l L++ +e + r + ++W+ + +++ + r+++qC++kw++l +y +ik++++k +++s
Manes.16G137900.1.p 45 WTTKEALILVNEIAAVEGDCLRVLSSYQKWKIIVENCTVLDVPRTANQCRSKWNSLLAEYNQIKQWDSKS-KTDS 118
********************************************************************95.3433 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MEATEATNEF QKKGTKRKKG VEDSSKKSCD AGAPRTTRSQ VAPDWTTKEA LILVNEIAAV 60 EGDCLRVLSS YQKWKIIVEN CTVLDVPRTA NQCRSKWNSL LAEYNQIKQW DSKSKTDSYC 120 FLGCEKRKQL GLPENFDEEL FKAIDDYVRA QKNCPDTDPD TDTEAQADLL GVIAKLGSKK 180 KLRTLLGEKP QNCCRKEPHL EVHTEEEPQN SLKEENPQMC CEKEKPQNIH AEEMPQKTLM 240 EEKPKNDYMQ KKKMTAAEEM EHMMVERLRE NAELIHAMVQ TNLPEVADFG ATDFVRGQGD 300 KIIARLGDIV NILNQYPHLA QASD*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 6e-58 | sequence-specific DNA binding transcription factors |