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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.16G123400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
FAR1 |
Protein Properties |
Length: 668aa MW: 77297.9 Da PI: 7.0011 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.16G123400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 76 | 7.8e-24 | 59 | 143 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fYn YAke GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ ++++w++ ++el+HnH+++
Manes.16G123400.1.p 59 DFYNVYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIVIRLVDSKRWRIVEVELQHNHPVN 143
6*********************999*****************99888.....9**********************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 668 aa
Download sequence Send
to blast |
MEEVCLNSEP VFDEGDDYEV EEDCSAEEHE NETGERYLKK EPLPPTVGLE FDSFDEAYDF 60 YNVYAKEQGF GIRVSNSWFR SKRKERYRAK LSCSSAGFKK KSEANNPRPE TRTGCPAMIV 120 IRLVDSKRWR IVEVELQHNH PVNPQIKRFY KSHKKMIIAA QKAQPPPEPV TEVHTIKLYR 180 TALPDAGGDG YSNFDKRDGA NLVDHSKHLK LKEGDAHAVY NYFCRMKLTS PNFFYLMDLD 240 DDGCLRNVFW ADARSRAAYG YFHDTVAIDT TCLANKYEIP LISFVGVNHH GQPSLLGCGF 300 LGHESVEYFV WIFKAWLKCM QGRPPQVIIT DQCKPLQSAV SEVFPEARHC YCLLYIMQKV 360 PERLGGLKGF EAIKRQLNKA VYNSLKIAEF ETSWADMIRQ HGLANNKWLQ TLYEERQRWV 420 PVYLKDIFFA GMIRLQENEG SNAFFDGYVH KHTSFKEFVD KYDLALHRKH LKEAIADLES 480 RNSNFELKTK CNFEAQLSKV YTKEIFKKFQ SEVEGVYSCF NTRQVSVNGP IVTYIVKERV 540 EMEGSEKEVR HFEVLYETSQ VDIRCICSLF NYKGYLCRHA LNVLNYNGVE EIPARYVLPR 600 WSKDFKLKCS PDHVSSNIDV YNPIYWQIHP YKAAIPIVEG GAQSPEHYKI ALQELDDLLN 660 KLNLVDN*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |