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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.16G117400.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
Trihelix |
Protein Properties |
Length: 339aa MW: 39122.6 Da PI: 4.2145 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.16G117400.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 35.5 | 2.7e-11 | 106 | 186 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W+++e +L+e+ ++ +l+r++l+ +W ev++k+ ++ +++r+ +qCk ++ l+++ykk+k+ ++ s+++yf++++
Manes.16G117400.2.p 106 WSEHEKFVLLEVWGDRFLQLGRNSLRSEDWVEVAEKVsESSKIKRTETQCKLMMDALKRKYKKEKAKGVNN-----SKWAYFRKMD 186
*************************************666789**********************999984.....58******97 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 2.2E-19 | 104 | 188 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MDDIEDDAGF PPKAHSFNRS RKLPAYSLYD QDYVVDDDDD DEFDEDQDSD DSYSSRRYSH 60 NLDKQNNDFD RYPKRQKLKS SVSNYELVPR SGRLLSYEEG NFSPDWSEHE KFVLLEVWGD 120 RFLQLGRNSL RSEDWVEVAE KVSESSKIKR TETQCKLMMD ALKRKYKKEK AKGVNNSKWA 180 YFRKMDMLMN QELGGGSGFS LACGVDSGEF VFMDTHVYLD RANGNDEMRD SPCESENEEE 240 EEEGAGNGGS DGVKGLKVLA DSVQKFGEIY EKIESSKREQ MMELERMRVE FQRELELQKK 300 QILERAQAEI AKIREGDDDV DEEEDTDDED DSGEDVSE*
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