PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G090900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 160aa    MW: 17690.8 Da    PI: 9.4313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G090900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98e-211564255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         gykGVr +k +g+WvAeIr p++   r r++lg++ taeeAa+a++aa  +l+g
  Manes.16G090900.1.p 15 GYKGVRMRK-WGKWVAEIRQPNS---RGRIWLGSYNTAEEAARAYDAALFCLRG 64
                         8******99.**********944...48************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-141564IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-231574IPR016177DNA-binding domain
SMARTSM003809.5E-371578IPR001471AP2/ERF domain
PROSITE profilePS5103223.091572IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-311673IPR001471AP2/ERF domain
CDDcd000183.91E-291672No hitNo description
PRINTSPR003677.0E-101627IPR001471AP2/ERF domain
PRINTSPR003677.0E-103854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MVRQSGARAE RRDGGYKGVR MRKWGKWVAE IRQPNSRGRI WLGSYNTAEE AARAYDAALF  60
CLRGPSATLN FPMNPPDIHS ATDLTPLQIR EAAFRHARRG SETTASQDLN SRVPASGLFE  120
ESSELHGEVY LPLTDHRAES LDKISGGAYY QAPGVWTVQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1814721372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G090900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596794.11e-116ethylene-responsive transcription factor ERF018-like
TrEMBLA0A2C9UB271e-114A0A2C9UB27_MANES; Uncharacterized protein
STRINGcassava4.1_018072m1e-115(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15296813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.13e-32ERF family protein